RnoINT0112269 @ rn6
Intron Retention
Gene
ENSRNOG00000011317 | Pkn2
Description
protein kinase N2 [Source:RGD Symbol;Acc:620146]
Coordinates
chr2:248789347-248811031:-
Coord C1 exon
chr2:248810731-248811031
Coord A exon
chr2:248789502-248810730
Coord C2 exon
chr2:248789347-248789501
Length
21229 bp
Sequences
Splice sites
5' ss Seq
CAGGTATTG
5' ss Score
8.35
3' ss Seq
CACTGATATTTTGTACACAGATT
3' ss Score
6.29
Exon sequences
Seq C1 exon
GGAGATTCCCGACCTCTTCCATTTTCTGAGAATGTGAGTGCTGTTCAGAAATTAGACTTTTCAGATACAATAGTGCAACAGAAATTGGATGACGTCAAGGATCGAATAAAGAGAGAAATAAGGAAAGAACTGAAAATCAAAGAAGGAGCTGAAAACCTGAGGAAAGTTACAACAGATAAGAAAAATTTGGCTTATGTAGACAACATTTTGAAAAAGTCAAATAAAAAATTAGAAGAATTACATCACAAGCTACAAGAATTAAATGCACACATTGTTGTATCGGATCCAGAGGACTCTGCAG
Seq A exon
GTATTGTACTTTGCTGTTTCTGTGATTTATTAGCAGAATGTACATCCTTCCAGAGAATTCTGTTTTATGATGGTAGTTTTTAGCTGTTGTAAAAATACAGAGACCATTTTCTGTTATGGTTAAGGTCTTGTCTCTGTACTGTTCAGATTAGTGAGTTTACGGTTGTGAAAACTGAAGCATATACTTACTTAGAAGTAACTTTTTATCCTTAGCAAGTAGGAAGGACTTGGAGTTATTGTCTAGTATTCTTTTGTACTGAATCAACCATATGCTCTTATCCTTATTATGATCAGTAGTGAAGTGTGCCAGATGACTTTTAAAAGTAAACAATCATTCCATGAGGCCAGGAGGATGGCTTAGAGAGAGGAAGGGTGCTTGTTCCTCAGCCTGAGCACTGCACTGAAAACTTGAGACCTTTCAATTTCCAGGACCCACATAATGGAGGGACTGATTTTCTTCTGACTTCATTGGTCAGAAGTCTCAAATAAATTAGTGTAAAAGAAAGATGTGTTTTATAAAAATCTATAATAAAGATTTTTCAGCCTTGAATCAAACTTATCACTTTGGTTCTTCGTGCACCATGAACCTGAGCTAAGCACCTGAACTCTGAGGCACATTGCTTAATAAGAAGAACAAAAGTCAAAAACAAAAACAAAAACAAACAAACAAACAAGAAAAACCTCCCAAATCCCAAACATTACCTTTTACTTTTTTGTAAGTATAAATGTAGGAGGGAAATGTAACTCATGGTTTCAATATAAGACCTTTTGTTTTTCACAGTTTCGAGGAGGGGGCAGTTGTGTGTGGGGGTGGGGTGGGGGAGTTGAGACAGAATTTCTCTGTGTAACCCTGGCTGTCCTAGAACTTACTCTGTATCCAAGCTGGTATTAAAACCATAGTCTGTGCCTCCAGAGTGCTAAGATTAAAGGCATGTGCCATGCCTCCCCCAGCTTCATTTTTTTGTTAAAAGCCAACAGATATTAGACATTTTTTTTCAGTAGTACAAGAAATGAGGATAGGAAAACTGCCTGCCTCCTTCAGACTAAAGGAGATTCTAGCTAAAGGCAGCATGGTGCAGCTTTCCAAGACAATGTAAGTAAATTAAGTCTATAGTCCTTTCATTTGCAAATAAACAAAGGGAAAGTCACTTTTAAAAAGTAAAACACTAGTGTCAGAGACTTTAGACAAGCATGTCATTAGCTAGTTAGTAAGATATAGTAGATATAAAATTAACAGTCTAAAAAGTGTCAGAAAATAGAATATGTAGTATTCTTCATTTACTTAATTGCTATCTATATGCAGGACTCAGAACTCATATTTGGAGGTTCTGTATGTAGATTTCAACCATGTGCAAGAACTTAATCTTTAAAATACATAAATAATAGGAAAGAAGTCTTTGTTTCACAACTGAAACAGCCCCAAAGGTGTGAATTAATTTGCTCAAAATAGTCAAACTAGTTATATAACACTTTCTATTTCTCCTCCTCAGCTAGTAGTCTCTTACCCATAAATTTTGTAATTATATTATAAATGGAAACATGTACTATGAAAATTCCGTTTTTAGTAGTAGTATTTTATAAACTAAGATAGTCTGTTGTGTTTGGATTTCTGCCAAGTCCTACATGTCTTGCCTATTACGTCTTTAGAATTCCAAAATAAGAAACTGCTAGAGCTTTAAACTCTATTTAGAGAAAGCATTTTTTCTTCATAGAATGCTGAGAACTGCCTTGTGATTCATTCAAATATGAATGTTTTAGTAACATAAAGTGTGGCCCATTTGGTTTTTATAGTCTCTTAAATAATTAATTTTAGTCGAATTAAAAACCCATGTGATAAATGTGTGAGTGATTTACATATATGTTGAAATATACTATTTGATGTTTTTTAAACAAATGTATATAATGTATCTAGGGACATTAGGTCTACTTAGGCTCCATCGCTTCAGTGATTCCATTCCTTACCATCCCAGTGAGTTCCCATTCAGTCCTCAGCCCTAGAAGTCACTTGTATACTTTCTTCACTTAGCATTCAATAGTTTAGAATATTGACCGTTTCTTTAGACATTTATTTCTTTAAGCCCTACTGTCAAATTCCTGGGCTCTCTCAGAAGCCAAGTTGATGACATTGTGAACCTTCCCTGTGGTCTCTTCTCTTCCTCTCTGTGCTGCTTTGTTCATTTATTGCTGTGTTGTAATTTATTTCCATCCTTGTTTATCCCTCACTAAACTGTGTGCCGCCGTGAAGGCTCACACATTTCCTCATGTTCTCCAGGGTTTTTAAAGAAACTGGGACATAGCAGCATATTATTAAGACTATTATAAATATTTAACACCCAGCAAATCAAAATTGCACCTTCATTTTTATCATTATTATGAAAGCATATTTTGTCATTTTGCTTTAAACATGAAATAAGGTAGAGTATAAGCCTAAAATTAAGTTTTAGGATAAGGCTAAAACCATTTTCTACATGTTTTGTTTGTTTGTTTGTTTGGTTGGTTGATTGGTTGGTTGACTCTTCTTAAATGATAATGTGTAATATGTACTTTCTAGGTAATTGGAAACCAAATGTATAAAATGTCAGTCTGTGCTTTGATTGCTTGATAATTTAGTGTGTAGGAACAAAACTTTGTAATTTGGTTAAAATCTGGAACAGACAGCTTTGTGTGTCAGTCCTTGCCTTTTACCTTTCTAGGTACAGGATCTTGTATTGTTTATGTATGCTGTGTATGTACACCTGGCTAGCTGGCCAGCAAATTTCTGAGGTTTCTCCTGTCTATGCCTCCTATCTCCCTATAGGAGGGGACACTAGGATTACAGATGTTTGCATTATTATGTCAGATTTTATGTGCTCCTGGGGATTGAACTCTACTTGTCAGACTTACACACTAAGCTTTCTCCTCAGCCTAGATTAGAGGCTTGTTCATAATTTACCTCTGAAGTAGTTCTTAAGTCATTGGTTACACACATGCCATGGCACATATATGGAGTCCAGAAGAGACAGCTTTGTTTACCATTCCTTGCCTTTTATTTTGTTTAGTACACTATCTTTTATTGTTTACTGCTGTGTACAGTAAACAGTTTTACCTATTTGTAAAGTAAGGATTTTTCTCAGAAGAACTTCTAAATTATATAATGCTAAAATGTTGTTTATTATAAAGGCCTGGACATTTGGTGGTGGTATTAAAAATTAAGGTATTCATTTGCTGTTCCAAGTCACATGAAATGAATATTTGCTATTCATGCCCAGAATTCTCTTAATCTTCCATTTGTTTTCCATATACTTTAAAATATAGGGAAAAAGGCTATCTCAGTAGTTGCATAGAAGCAAATGACAAAATTCATCCTCTTTCATGATAAAAAAAATTCAACAAATTAAAAGTAATAAAAATTGCACTCAACACACACACACACACACACATGCATATATGAGAGATAGTCTCACAGTTCTTTAATTTTCTTTTTTTTTTTTTTTTTTCGGAGCTGGGGATCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACTGCTGAGCTAAATCCCCAACCCCTGAGTCTCACAGTTCTTATCACATTAGTGGTGAATAGTTGAAAGCTTTTCCTAGATGGTCAGAAGCAAGGCAGGATAGCCACTCTTAGAGTTCTCATCAGTAAAGTACTAGAAGTCCTAGCCTGAGCAAATTAGGAGGAAAAGAAATAAAATGCATCTAGACAATAAAGAATGCTGACAACATTATTTTGTATATAGAGACTTTCATCTAGTTCCCCAAAATCCCCCCCCCAAAAAACTATTGGAACTGATAATTAAATTTAGTAAAGTTTTAGAATACGAAATCGGTGGCATTTCCTTATATTAATAGTACAATGAATGAAAACAAAATTTTAAAAATCCTAATTATTAATAGTATAAAATTTCACATATTTAGAACATAACCAAGGAGATGAGCAAACCGTACAATAAAATTTGTTAAATATTGGGTATAAGAAATTTAAATGTCATAAGCCAGTGGGAAAATGTTCTATGCTCATGGCTAGAATAATTAGTATTGTAACCAAGGTAGTGCAGGCCTGTAAGCTCTTCTAACTTAGAAGGCTGAGACGAGGGTTGCAAGTTCAAGGTCTACTTGGTCAGCAAAATGAATTTAAGGCCTGCCCAGATAAGTTAGTAGATCATATCTGAACTTGCAAAGTAGAGGATCTAGGGTATAACACAGTGGTAAGGCTTTGCCTAGCTTGATTGAGTCTTTAGGGGGTGTAAAGCAACATTAACATGTCCATATAGTGAAAGAAATCTATAGATGGAATGAAGTCTCTGACACAATCTCAATATTCTTTTATTTGTAGTGAGTGGGGTGTGCATACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCAAGCACCACATGTATAGTAGAGGTCAGAATACAGTTTCAGGAAGAGTTCTCTCCATCTATATAAGTTATGGAGATCAGATTCATATCATTACCTTGCAATATCTTTTGTGCCGTTTTGCCAGACTCCAATATCATTCTTCACAGAGATAATATCCATAAAACTCATATGGACCCACAAAAGACAGAGTGACTAGAGCCATTTAGGAAAAAAAAAATCGCTTCCTGTGTTTACCGGAAGTCCCACACCTGCGGATCCCGGACCGCAGCAGCTCTCTGCTCCCAAACCCCGTGGGAGAGAGACCTCACCGCCTGATCAGGTGGGCACTCCTGAGGCTGCAGAGCGGAGGAGACCACCAACACTGCCCACCCCTGCCCACATCCCTGGCCCAAGAGGCAACTGTATAAGGCCTCTGGGTTCCCATAGGGGAGGGCCCGGGAGCGGCAGGACCCCTGCGCCTGAGACACTGCCGGAACCTGAAGGAAACAGACCGGATAAACAGTTCTCTGCACCCAAATCCCGTGGGAGGGAGAGCTGAACCTTCAGGCAGGCGGACACGCCTGGGAAACCAGAAGAGACTGCACTCTGTGCACATCCAGGCGCCAGAGGAAAACACCAAACGTCATCTGAAACCCTGGTGCACGGAGGCTCCCGGAAGGAGCGGCACAGATTTTCCCGGTTGCTGCCACAGCGGAGAGGACTTAGGCAGTACCCCACGAGCAAACTTGAGCCTTGGAACCACAGGTAGGACCAACTTTTCCCCTGCAAGAAACCTGCCTGGTGAACTCAAGACACAGGCCCACAGGAACAGCTGAAGACCTGTAGAGAGGAAAAACTACACGCCCGAAAGCAGAACACTCTGTCCCCATACTGGCTGAAAGAAAACAGGAAAACAGGTCTACAGCACTCCTGACACACAGGTTATAGGACAGTCTAGCCACTGTCAGAAATAGCAGAACAAAGTAACACTAGAGATAATCTGATGGCGAGAGGCAAGCGCAGGAACCCAAGCAACAGAAACCAAGACTACATGGCATCATCGGAGCCCAATTCTCCCACCAAAGCAAACACTGAATATCCAAACACACCAGAAAAGCAAGACCTAGTTTCAAAATCATATTTGATCATGATGCTGGAGGACTTCAAGAAAGACATAAAGAACTCCCTTAGAGAACAAGTAGAAGCCTACAGAGAGGAATCGCAAAAATCCCAGAAAGAATTCCAGGAAAACACAATCAAACAGTTGAAGGAATTAAAAATGGAAATAGAAGCAATCAAGAAAGAACACATGGAAACAACCCTGGACATAGAAAATCAAAAGAAAAGACAAGGAGCTGTAGATACAAGCTTCACCAACAGGAGAGAATCTCAGGAGCAGAAGATTCCATAGAAATCATTGACTCAACTGTCAAAGATAATGTAAAGCAGAAAAAGCTACTGGTCCAAAACATACAGGAAATCCAGGACTCAATGAGAAGATCAAACCTAAGGATAATAGGTATAGAAGAGAGTGAAGACTCCCAGCTCAAAGGACCAGTAAATATCTTCAACAAAATCATAGAAGAAAACTTCCCTAACCTAAAAAAAGAGATACCCATAGGCATACAAGAAGCCTACAGAACTCCAAATAGATTGGACCAGAAAAGAAACACCTCCCGTCACATAATAGTCAAAACACCAAACGCACAAAATAAAGAAAGAATATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAGACCTATCAGAATCACACCAGACTTTTCGCCAGAAACTATGAAGGCCAGAAGATCCTGGACTGATGTCATACAGACCCTAAGAGAACACAAATGCCAGCCCAGGTTACTGTATCCTGCAAAACTCTCAATTAACATAGATGGAGAAACCAAGATATTCCATGACAAAACCAAATTTACACAATATCTTTCTACAAATCCAGCACTACAAAGGATAATAAATGGTAAAGCCCAACATAAGGAGGCAAGCTATACCCTAGAAGAAGCAAGAAACTAATCGTCTTGGCAACAAAACAAAGAGAATGAAAGCACACAAACATAACCTCACATCCAAATATGAATATAACAGGGAAGCAATAATCACTATTCCTTAATATCTCTCAACATCAATGGCCTCAACTCCCCAATAAAAAGACATAGATTAACAAACTGGATAGCAACGAGGACCCTGCATTCTGCTGCCTACAGGAAACACACCTCAGAGACAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAACAACTTTCCAAGCAAATGGTCGGAAGAAGCAAGCTGGAGTAGCCATTCTAATATCAAATAAAATCAATTTTCAACTAAAAGTCATCAAAAAAGATAAGGAAGGACACTTCATATTCATCAAAGGAAAAATCCACCAAGATGAACTCTCAATCTGCTTTGTTCACCCTCCCCCCTCCCCTTCCTTGTGCGGTGTCCCTCCCAACTCCCCCTATGCACCATCCCCTCATAGTCTAGTTCACTGGGGGTTCAGTCTTCAGCAGGACCCAGGGCCTTCCCCTTATCAAATATCCATTCCCCTACACTTGAAATGTATATAAGACCCTTCCACACTAAGTTTACTCAATAATAAAAAAAAATAAAAATAAAAAAAAGTGATAACAAAATTACAACTATATAGAAGAAAATCAAAATTGTTTACTCTTAACCTTAACTGGCAAATGACAAGGAGTTCTAGAGCTCATATAATTAAAAGGAAGTCCATGTATAGTCTTTAATCAACTATCAGGTTAGTTTGCGACTTCAGAGTGAGATTTATATTTCTTCTCCATAGGAAGTCATTCCTGATTGCTTGTATATGTGTACTTTTTCACCCTCCCCCCTCCCCTTCCTTGTGCGGTGTCCCTCCCAACTCCCCCTATGCACCATCCCCTCATAGTCTAGTTCACTGGGGGTTCAGTCTTCAGCAGGACCCAGGGCCTTCCCCTTATCAAATATCCATTCCCCTACACTTGAAATGTATATAAGACCCTTCCACACTAAGTTTACTCAATAATAAAAAAAAATAAAAATAAAAAAAAGTGATAACAAAATTACAACTATATAGAAGAAAATCAAAATTGTTTACTCTTAACCTTAACTGGCAAATGACAAGGAGTTCTAGAGCTCATATAATTAAAAGGAAGTCCATGTATAGTCTTTAATCAACTATCAGGTTAGTTTGCGACTTCAGAGTGAGATTTATATTTCTTCTCCATAGGAAGTCATTCCTGATTGCTTGTATATGTGTACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTCCGGAAACCGGGAAAGGGAATAACACTTGAAATGTATATAAGAAATACTCAAGTTAATAAAAAAAAAATAAAATAAAAAAAAAATAAAAAAAAAGAGAAGAAAAAAAATCTAGAAGTATCTTATTACTGGTTTTCAAAGTATATTTTAAAGCTATATTAATTAAAACAGCATGATATTGGCATAAAGCATACATCAACTAATAAAGTAAGCTGGCCCAGAAATAAGTCCACACATTTATTGTGAATTTTGGCAAAAGTGTTAGGAATGAATGCACAACTGTGAAGGCCTCTTTAATAAATACTGTTTAGAGAACTTCATTTCCATATGTGGAGAAATAAAAACAGACCCATAGTGCACCCTTACACTGAATCAATTAAAAACGGATTAAAGGTTTAAATGTAAGATTTGAAGCCATAAGCTACAAGAGGCAAACTAGGAGAGAATATTCATATCCTTGGCTGAGCAGAGCCTTCTTGAAAAACAAGCAAAAGAAACAGCAGATTGAAGAGACAACATACCAGTTACAGAAAATATATGCAAATTATATATTAAAATATTATTCAAGAAATGCAGACTACCAACAAAGAAAACATTACCCTAGGTTTTTGGTTGTGTGTGTGTGTGTGTTTACGTTTTTTTGTTTATTGTTTTTTGTTTTTATAACTTACTCACTTTACATTCTGCTCATTGCTCTCTTTCCGGTCACCCCCTCCCACAATCCATCCCCCTCTCCTCTTCTCCTCTGGGCAGGTGGGGGCACCCTTGATTATCCCCTTACCCTGACACTTAAGTCTAAGAGGTTAGGTGGTTCCTCTCCCATAGAGGTATGGTTATGGTTCACTGCTAGTGTAAGACTAGGCTCTACCCAACACTACAAATATGGGCAAGGGATTAAAAAAAAAAACAAAAAGTAAAAACAAACAAACCCTAAATATAAACATTTCTTATAAGAAATAGAGATTGAAGTGTTTAATATCTAATCATTGGAGAATTGTAACTGAAAAACACGGAGAGATATTTTTTCCCACCTCTTAGATGAGTTATTTATTTAGAAGTGGAAGGATACATATTAGCAAGGATGTGGACAGGGAGAAATCTGTGTGTTCTTAGTACTATTGCAAGTTAATAGAATTAATAAGGGAAATAATATGGAAGATTTCTCATAAACAAAAAATAGAAGAAGCTTCTCCCTGGTAAATGTGTGGAAGGCCGCCATTCTATCAGTACCACTACAAACACCACAACTTGCCACATGGTTTAGTAGTCTTACTTCTGCGTATTTGTTCAAAGGAATTGAAACCATGGCATGAATGAGATGTTCACATGCCCCCATGCTCCCTGCAGTATGTTTTACCATATGTAGTTATGCTGTGGAAACAATTGACGTGTTCACCAATTAACAAATGTGTTAGAAATAGGATTTCAATCTGGAATATAGTTGACTTGATTAATTTGATAGTTGTGCTCTTTCCTTCTAAGCACAAGGCTCTAAATTCAATCCTCGGTACCACCATTCCCTCACATGGTTTTATATTTGTGGGGAATACCAATACGCCATTAAGTAGCTGGAAACTGTCATTTGAAACATAGATTAACCTAGTGGGCATTGCAGTACAGCAATCCATAAAGAGAAGGAGACAAGTACTATATCAGATTATTTGCATAAGTAATTTAAAAACAACTCAGAAATAGAGCACAAGGAACTATGTAATTAGCTTAATTTGGACATTTCCTGGTATATACATGAAAGATTACACTGTACACAGTAGTTACTCACTAATTAAAAGTATAATAACACTTTTTAAAAAGAGAAATCTCCTTTTACAAAAAGAATAATCTCATGAAATGCTATTTTTAGCCCACATAGAAATTAGTGTATGGTTAGTTAGGATTAAATGTACCTTACATGAAAGATTATGGTCTATATAAGATGGGACTGCAGTTAAGAATTAGCACCTGACTTAAAAGGATCTGTTTGGGAAAGAACCATTTCTGAGTCTTGGTCTCTTAAGTGAAACATTCTTAAAGAAGAGGCTAAGAAAATTATGCCAGGTCTTTTAGTGCCTCGTTAGATACCTGAGACAGGCGGATCAGGGGTTCAGGCCAGCCTGGGTTAGACTACATAGTGGATTGCAGGCCCCTAGTGCTGCACAGTGATGCTGTGTCTCAAAACACACAAGCCCTAAAACACGTGTCAACCATGGGGTTATAAGCTTTAATTCTAGCACTTGGAAGGCCTAGGCCCTGTCTCAAAAAAACCAAAACCAATAAATACAGCATGTTTTAAGTTCCCTGTTTTAATCTGTTAAAAATTTTTTATTTAGTGTGTTGTGTATATGTATGGGAGGGTTTGGGGTGCACAAGCTACAAGTTGTAGGGATTGATCTCTGTCTGATTAAGCTTAGCAGCAAGTGCTTTTATCCACTGAGCTATCTCCTTGACCCACGTTTTTCATTTCATGAAGTCATTTTTCTATCTTCTCATACCCTCAAAATACAGTAATTACAATTATTAATCTAATGATTATTTTCTTTAACATCTAGAATATATATGAGGGGTTTTTGTTTGTTTTTTGTAAGCATGTAAAAAATGAGGTTTGTATTTGTTTTTTCCAGGAGAAAGTTAATCTTAGCTTTTTTTTTTTTTTTTCAATTAAACCATTTTTGGATCAATAGAAGTATAAATTTAGTTTTGCTGCTATCATAATGGTGGCATGAAAATTAAAACTGAATTTTATATGTAGTATAGTATAAAGGATGAATCTATCAAATGTTTTGTTGTACAATTGCTTAGTATTCCTACTATCTAATGAATTCCTCACTCTTGAGCAAATTGAATTGTAAGTTTACCGAGGGTGACTATGTGACCAGTAGCAAGTCACTTTTTCCATACCTGGACTTGTTTCCTGTTTGCCATAAGCATGCAACTAAGTGGTGTATAGATCTTTAATGTTTTATCCTTTTATTTAATGTATATGAGTGTGTTGTCCCCATTCATATGTGTACCGTGTGCATGTCTTGTGCCCAAGGAGGACAGAAAAGGCATATAGTTACAGCTGTTGGTGAACCTCCATTTGAGTCAAGAAGCAGCAAATGCTCTTAACTGCTGAGTCATCTCTCCTGTTCTATTACTTCAATTTTTGATGTACTTTCAAAAAAATACTAATAAGGTAAATGCTTGTTTTGGGGGTTTGCTTTGTTTATTTTTTGTTTTGTTAGTTTTTCTGTACCATCCTGGTAGTTAAGATATTGTAGACGCACCATAACCTAGACTTGCTGAGAAGGAAATCTCAAGAGAGTCACTGAGGTCAGGTGGCCCCTGTCGGTGAGGGCTTGATTTTAGTGCCTTACTTGATGTGGTAAGAAAAAGGAAAAGATGGATTCTATGTGGCACCAATCCTTGAGCAGAAGAAAAGATTGTCTTTATGGCCCCACACCCAAAACTTCACTACTGCTAAGCCTTGTAGTCACTCTTCTCCCAAGTCCATATTCATGGCAACTATTTATGAACAGTTTTACTTTTAAGAATGTCATCAAAATAGAAACACAGTAGTCTTTAGAAACTGAAGTTAGCCTGTTGTCTTTGAGATTCATCCAGGATGTATGTATCGATAATTGTAAAATTCTTCTGAGTAGTCAGTTGTGTAGATATATTACAGTTTATCCACTCACCGAGCATATTGGAGTTACTGTTTTAAGTAGTTGTCAGCCAAATTGCTATAAATACTCATGAATTAGTAAAAGTTTTCACTTCACTTTGAAAAAGGTCTAGGACTAAGACTGCAAGGATTTGTGCTATAGTGTCTTTAAACATAAATTGCCAAAGTATTTTTCAGAGAGGCCATATTATGTTTCCTTCTCACCAGCAATGTGTGGGGATTTTGTAATACCACATACTCTCCAGGTCTGCTTTTAGCCAGTCTGTCGTGTGTAATGGTTGACAATGTGCCTTGTACTTTCAAAATTGAAGCAGGATAAAGAAAAGTTTAAGGTGAATTTAAAAAGCAACTGTGTATACCTTAGGCACAGAATGTGTACAGAGTAAAGTCTCCTTTCCTTGGAGGTGCTATACACTACTTTCAGACAATAAAATACAACACAGTAGCAATTCTGAACAAATATTGCTACCAGTGTTTTTTTACCTAAATCAAAAGCTGTCACACCCAACAATCTTACCCATGTCTATTGCTTGTAATGTATTTTAAAAAGCTAACCTGCGTTGACATTGGTTTATTAAATATTTAAGCAAACTTTCTTCGGTTGTATATTCAGTTACCTTGTATACAAAGTAAGAGAGCTCCATTATATTTTGAGTAGGGTTCTGGTGACTATAGAAGACAAGTTTCCCTGTAAGTAGGAAAGTTGCCCAATGTTTTAAATGAAGAAAATAACTTTGTTCCGTTAAGCAGACACTCTGGCTATACAAATGTACCTTTATGCATTTTGAGCACAGAGTCAGCTAACTATAAGTGAAGACCAGAGGTAATCTATGATGTGAGTAGTCATCCAGCTAGATCATTATATTGCTTTATGGTTGAACACCACTTGGATGACCTTCAGACCTTGTTTTTATTATTTATTAAAAAGAAAAAGAAGCTAGGTAGTATATTCCTCCCTGGGGTATTTTGTGAACATGATGTTTTAATAGGGTGTGGGTCAAGCAAGAGGCACCTAAGCTCACATGCTCAGAATGTAAAACCTCTCTAGATGTATATAAAATCTTAAGAAAAGTTTTCTGACACAAGGAAGAAAAGACTCAATGTCAACTACATTTCTAATCTCAACGACATCAAGGTGGCCTGGAAAGATGTCTAAGAACATTTGATGCTTTTGCAGAGGGCCTGAGTTCAGTTCCTAGCACCCTCATAGCAGTTCATAGCCACTTGTAACCGCAGTTCTAGGTGGTCCAATGCCCATGTCTGGTCTCCACAGGCACAGGTACTGCATGCTTGTGGTAGACTTACATACATGCAGAAAAAACACATTCCACATGAAATAAAAATAAATATTCTTAAGGGGACAGTTAGGGAAACTTGATCTAAAAATAATGCTTATTCCCATGTTCTAAACATCTAATATATCTTTGAAGCATTTATTCAGTTGTGGCTTTATTAAAAATACTAAGAGTTCCAGAAGCCAGTCGGCAACATGGCTCAGTGGGGTAAAGGCTTTCCACTTCACCTACTGACCTGGCTATCCCCAGGACACCTATGGTGGAGAGAGAGAACTAGCTGACTTCTGCGAATAGTCCTCTAATGTCTGCATCCACACCATGCTACCTGTGCATGTGTTGCACATGCATTACAATGTGATTTAAAAAGAAAAAACACCGGAAGCAGCATATCTGATGCACTACAGATTTGTGGTGAGGAAGGGTGATAACAAATCAGTATTTGTTCTGACCTTTGGAGTTTCATCTCTAGCGATCTTTTAACCATGCTGCATATTCTGGTGACTTCCAAAGTCACCAGATGTGTTAGCCAGGCTATGTTCTCTGAACAGTACTGATCTACTTATGGTCTTTGGACAGGGGCATTCTGTTGCCTTTCCCTTCTATCGTGTCTGAAGTTGAAAAGGCTTTGCCTGTGTTGTCTAGCCTGTTAATGACATTACTCCAGTGGCTCATAATTAAACCTTGACTTAGTATGAGCATCGTCCTGGCCACCTTCACTTTCCCATTCAGGACACAAAGGCCTGATTATATTTTATAACAGGTATTATTTCTATCTTTTCTTCTTTACAGCCAGCTTTTCCTCATTCCAACTTAAACTTTGCACGTACCTTCATTTTTAACCCAGTTTCACTGGGGAGTTGGGTTTTTGTTGACTGGGTTGATTTGGCTTGTTTGCTTGCATCCTTGTATTTTTCTTTTTGTTTTTGGGGGCAGGATCTTGAAGCCCAGACTGGGCTCAAACTTGCTGGTAGCTAACAGTGACCTTGGACTCCTGAGCGCTGGGATTATAAATTCATCTTACATCAAGCTTCCCGATACTGATCCCATTCTGTTGTTTGTTTCCTTATTTCGTGTTTTCAGTGGGTCTCCATCCTCTCTGTACTCATTTGTATACAGTACAAATGTATAACATGTCCAAGATTCCCTTTATAATGGCCTGGCCTCTGCATGTTACTTCAGTTTCTGTAATAGTTATGTTTGCCCTGCTTCTTTTACCTCCCTGTACTCGCACACATGTTTATGTGCAGAGGCTTTATAAACTCCGTGTGACTGCCTTGGAGAAACTATTTTCTTCTGTGAGTGGTTAGTTAGAGAGCCTGTCTCCGTTAGAGTTGGGAGCTCATGTCTACGTCCCATCTCAGTACTCGGACTAATCTTGTGCTGAACTTGTGCTGACCCTATGCATTTTTAAATTATTTGATACTTTTCAGTTTTTTGCTATTTTATTTCACATTGCATATAACATATATGAAATTTCTTAAAAATGTTCACTCTGCCTTCTTTTTTTGTTCCACTTCTGTCTTCTCATTTCTCTTCTTTCTTACTCTTCCTCCTTTCTTCTGCTTCTTCAACCCAGAGAATAATTAATGCTACCTATTATGTGTTCATGAATGTGAAACCACCCACTGTAATTGTAATAGTGTGTCAGTTTCAGTCAAGAGAAGAATATGTGCGTCTAGTTAGACTGAGGGATAGTGGGGAATGTTTCCTAGAAAAAGTGATGCTTATTCTAACAATAGTATAAAAGAATGCTTTTCGTAGTTCAGAAGCAGCTGAACATTTTAACTTATCAGATCTGCCTGGAAAGTAGTAGTGATAGGTTAGCTTGGGGCTGCACAGCATAGGTCTTTAGAGCCCAGTTGCTGATTTAGGTATTTACTTGGAAAGCAATCATTTAAAAATATTTCTGTGAAAGAATTAGTTCTGCCCACTATCCATCTTAAAACAGCAATTTATATTAGTGTTCATAAAGACATTTCATTGAGCTATGTCTACTGCTCTGTTTATTTACATAACTTAAAAAAGTAAAACATCTTGATTTACAATCATTCAACCAAACTTATTGACTTTGTATACTGTTTTAAAATAGCATAATGATGTTTAAAAGATTAGACATATGCATAATTTCTTATGATAGCCCCCAAATTATTTTATTTACTAATTAAGTTTTTGATAAGTTTAACAATTGATGCATAGAGATTTGTCCTTGGTTATAATAATGGGGCTGACTCTAAGTGGCAAGTGTATGTTAGGTTAGGCATGGCATTGCACCTGTGAAACTAGCACTGAGAAGTTTCAGGCCAGTTGGCTGGGTAGTAAGACTGTTTCAAGCAAACTACTGTATCAACATTTTTTTTCTTATAACTTAAAAGGCAGTCTTAGAATACAATTTTTTTCATCTCAAGCAATTACTTTTTAATTTCCTTAAAGATTTTGTTCTAACTACATTTTTGTCATGTTGTACACACTTAGGAGGATACCTGTGTGGAGGTGAGAGGACAACTTTCGAGAGTTGTGTTCTCTTTCTATCATGTGGGTGGGTCCTAGGCATTGAACCTAGAGGTTCAAGCTGATGCAAGGACCTTATATTCATTGAGCCATCTCACCAACCCAAAGTGAACATTAATTAAGCCTTTTTGTAAACTCAGTTTTGAAATATTAACAAGTACACTGGACATCCAAATGTCTTGAGTTCAATTCCCAGCAACCATATGATACCCTCTCCTGCTATGTCTGAAAAGAGGAACAGTGAATGAATGAATGAATGATTGAATGAATCTTTAAAAAAAAAAACAAGTACACTGGAAACAATTCGTTTTCTGATGTTAAGATTTATCAGTAATCTATAAGAACAAAATGAGAAAGCAGCAAGTAGGAAAGAGTCTATATCCTTTCACTTGCTGCGTGCGTGCTTGTTTAAGTAGGGTCTTACTCTCTAGCCCATGCTGACCTCAGCATCACTGTGATCCTCCTGCCTTAGCAGCTGGAGTGCTGGAAGTCAGGCACGAGAAACCACACCTAACTATTTCTCTGATTTCTAAGTGGAAATGGAGGGAGGAGGGAGATCCATCTTCTGAAGCATATCAAAAGATGGTGTTTGCATTTGTGAACTTCGAAAAGTACTTCTCAGAGTTTCTGGAAAGATTAAATGAAGAGGACTATCAGCTTTTAGCTGAGCACTGAATTAATTCATAAACCCTTAGTGTCTCTAAGTATTGCTCTTCTTAATAGCTGCAACACAGCTGTGTTAAGTCTGCAGTCAGAACCACACCAATAATTGACAGCCACAGTGTTGCCCTGCAATAGGGGCTCCAGAGCTGTTTTTTCCTATGCTCCTGTGGTCCTTCAGACTGAAGATATTGCATGCTACTTCTGTAACTTTACATATAGTAAATATTTCAGTGACATACTCGACTTGCAGTAATAGACAAGAATTTAATATTCATAATAAAGTTTCGTATACATGTTTCTAGAGACATCATTTTATTACATCATCAGGCAAACCATGTTATTGTTAGACAGCCCTAACAACCAGGAATTCATTTCCTGATAAAATGCATGTCCCCACCACTTATTATCCACTGAATTCTCTAACCCATGTGGAAACAGGAAGAGGACAGCTTTCATTTCATTGAAAGGCAAATGTTTAGACAAGGATCTTTTCTCTCCTCATCCGAGGCTATACACCAGCCGCTGTTTTACAAACAACACATTCCTGTTCTTTCCTCAGCAGAGGGCTTTGTATTTCTTTAGACTTTAGTTCTTTTGGAAATGTGTTTTTATGACAATTATGCCCCAGATCTGTGTGATTTGGGGTTTTTACAACCTTTATATCACTTATATAAAAAGGGAAGTGGAAAAAACGCTTTTAGAACTATACTGTAGATTTTAATTTTATAACCTTAGTTGAGTTCATTTTCCACAGTAACTGTGGCCAGTTAATAGTTATTAAATATTTACTACGTACCACACCCTTTTCTCAAGTCATTATACATAGCCCATTTGTCTTCACAATAATCTTTGAGGCACATACTGTTTTCATTATAGAAGATTAACATGAGACACAGCCATTCAGAAACTTTCCTGTTTTACAGTGTTTGAGCTGGATCTCAGTAGCTAAAGTAATGCACATCTAAGTACCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATATATTTTGAGACAGGGTTTCTCTGAGTATCTCCTGGCTGTCCTGGAACTTGCTCTGTAGACCAGGCTGTCTTCAAAGTCAGAGATCCTTCTGCCTCTGCCTGTTACGGGCTGGGTCTAAAGGTGTGCATGCCCTGGGTATGGTGGCTCCCATCTTTAATCCCAGCAAAACAGGAAGCAGGGGCAAGCAGATCTCTTTGAGTTTGAGTGAGTTCCAAACCCTGTCTGAGAAAACAAAATACAAAAGTGTATGTCCCCACACCTAGCCAGATCTCATTCCCTATATTCTATATGGTCAATAATTCCTGTGAACTAATTTGAAAACTGTAAGATTGTGTATGTATAAAATGATTTTGGTTAATTCAGTTAAAATAGCAATCTTTCCCAAAGTGAATTCTAGCTAATAATTTGGTGGCCTTGTCTGAGTCTTGAAATAGATGATATCTGTCTAAAGGGTTACTTAAGAATTATTGCACACATACTCATGGGACACATGATTCTACTGTTGTGTTCTTAAGTATTCATACATATACAGAGTGTGGTATAGTTGCTTACAGGTCTTTGTCATGCACAACTAAATATGTGCTAAGCACATAATAGAGCACAGCAATTAGTAAGGTAGAGGTCAAAACAGAACTGATTAGGTTAAATCTGTTTTTGTCACTTCGTAGCAGTATGACATAGGATATATTTCTTAATCTCTTTACGTTCTGGTTTTCTTAGTTGTATTATGAGTGTAGTAGTTCAGGGCTGCTTATGAAGATTGAGATTGATGCTTATTTACTTACTCATGTGTACTTACTACACTTATTATTTGCATGTGTTTGGGCATATGTATAGGTATTGGTATATCGCAGCATGCATGTGGAGGTCAGGACAACTTGTAGGAGTCAGTTCTCTCCTCCTAAAAGCATACAGCTCTTAGGGATCAAAACGGTAAGTGCTCTTACCTGCTGAAGCAGTCTTAGTCTACACATGCTCATGTTGTAAAAGCATTTGCATGAGTCCTTGTATCTAGTACATCGTTTATAAATGTTTTGGTTTTTGTGTTTTCTGAGGCAGGGTAGCCCAAGCCTGCTTTGAACTCAAGATCTTATTGTTTCCATCTCCTGACAGTTACAGGTGTGACTCGTCAAGTCTGACTAATTGTCCTGGTCTGTATTTTTTAAATTAGGGGATTAATATGGATAATGTAAGAAACCAATGACCTTCAATATGAACATTTAGAGACATTGTCAAATTATTAGAAGTCCAATAAAGTCACTTTGAAGTCATTTATATTTTGTTTTTAATTTAAATATAAGCAACATAGTATTCTGTACAATACACGGTAGACATATATATTGTCTCTTTATCCCAAACCTATCACAATTTGATATCAATCAATATCCTTGAACAATTTCTATTATAGATAAATCTCTTGCAGTATAAAAGGATGTGAACATTTTTGTGCTTCATTCATGAGCACTTAATGTCAGTACATTGTAAAATTCATATTAAGTTCTGTTTGCAGAGAAATAACAGGGTAGAATTTGTAATATTTGGATATTTTATTCTCAATAATGTGACAAAAGGAGAATTTAATTACTGAATAGAATAGTCAAATTGTGTAATGATTTAATTTAAATGTAGTATTTGAAAAATTTGGGTAGGCATAACTCATCTTACGACAGACTGGTTCCAGACTCACCATATAGCCCACACTGGCCTTAAACATGTAATGATCCTTTGGCCTCAAACTCCTGTATATAGGGATTATAGTGTGCCGGGCCCCACATGGTCACTCTATAGGGAGTAAGCTGAATTAAGGTAGTTCTGTAACTACCTGTTGCTCAAGTGGTTCTGTTCTTGAGTTGGTTGAATTTTTTATTATCTATAAGCATAAAGAGATTTCATTTAAGTGACTTGAAACTCATTTTAAACTGTTGTTCTTTGAATATATTGACTTACATGTTATGTTTTCAATGATAATTTTTATTAATGTATATCAATTGTATAATATAATGGGTTTTACTGTGCCAATTTCACATGTAACATATTTTGGTTAGATTCACCCTGAAATTATAGTTTTAAGCAACAGTTGATTCTACTAGTTACAATCACTGATATTTTGTACACAG
Seq C2 exon
ATTGTCCGAGGACTCCAGATACTCCAAATAGTGACTCTCGTAGTTCTACTAGCAACAATAGATTGATGGCCTTACAGAAACAACTGGATATAGAACTTAAAGTAAAGCAAGGTGCAGAGAACATGATACAGATGTACTCAAATGGCCCTTCAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000011317:ENSRNOT00000031748:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.267 A=NA C2=0.636
Domain overlap (PFAM):
C1:
PF0218511=HR1=WD(100=67.3)
A:
NA
C2:
PF154561=Uds1=PU(50.7=73.1),PF0218511=HR1=PU(45.1=61.5)
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]