RnoINT0144180 @ rn6
Intron Retention
Gene
ENSRNOG00000013934 | St5
Description
suppression of tumorigenicity 5 [Source:RGD Symbol;Acc:1308995]
Coordinates
chr1:174158236-174174250:-
Coord C1 exon
chr1:174173000-174174250
Coord A exon
chr1:174158423-174172999
Coord C2 exon
chr1:174158236-174158422
Length
14577 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGG
5' ss Score
11.08
3' ss Seq
TACCTCTCACTCTCTCATTCTTT
3' ss Score
-8.97
Exon sequences
Seq C1 exon
GTCTCAGTCAGTTTCTCCGCCTCCAGTTTTATACCCACCAAGAAGTCCCATCTACCCACTCAGTGATAGTGAAACCTCAGCCTGCAGGTATCCCAGCCACTCTAAATCCCAGGTGCTTCTCAAGGACCGGCACTCCCGAAATCCTTCACCTCTAGGTCAAGACCCCTCCCCAGACACTTCACCACCCATCTGTACCCTCAAGGCTACCAGCTTCAGCTACTTGGACAGAACCCCTTCATTACGCAGAAGAGAGGACCAGAGGGAGAGCGTTCAAGGTGCAGTCCAGGATGTAGAGGGTGTGGCTGCTTGCCTTCCCCTTGCCCAGAGCACCCCATTCCTAGGGTCTGGCCCACGGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCCACAACCTGGGTATCCGAGAGAAGATTTCAGCATGGGAAGGTCGCCGAGAGGCTTCACCCAGGATGAATCTGTGTGGAGAGAAGCGGGAGGGCCCTGGGAGCGAGAGATCGGTCAGTGAGGGCTGCCCTAGCGTGGGCTGCCCCAGTGTGGTGCCATCCCCTTGCAGCTCAGAAAAGACCTTTGATTTCAAAGGCCTCCGGAGGATGAGCAGGACCTTATCTGAGTGTTCCTACCCTGAGACAGAGGAGGAGTCAGAGGCACTTCCTGTACGGGACTCTTTATACCGGCTGGAGAAGCGTCCAAGCCGGACTGAGCCCAGTGCCTTGCTCAGGGGCCATGGCATCAGGAAAGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAAATTGAACAAGCCCTAAAGGAGCAGCCTGGCTGTGGTCTCCCCCAGCTCCCTAGCAGCTGCTACAGTGTAGACCATGGGAGGAGGAAGACTGGAACCTTGGGCACCTCGGAGGAGCCAGCAGGAACTGCAAGTGTAAGCTCCAGCAGCAGGGCAGGAGGAGCCACCGGAGTTGCCAGGGAGGCAGGCCCACCCCTGGACAGGGAAGGCAGTGGTTCCATGAAGTCAGAGACTCCTGGAAATAGCTCTAGTCCCCAGCTGCTGCCTTCAAAGAGCTCCCCTGATCCCGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTACGAGGCTGACAAGAATCCCAAGCCGAAGCCAAGCAATGGTCTACCTCCTTCACCCACACCTGCTGCTCCACCTCCCTTACCTTCCACCCCAGCCCCACCAGTCACCCGGAGGCCAAAGAAGGATATTCGTGGTCACCGGAAGTCACAGAACAG
Seq A exon
GTAAGGCATGCCCTCCCGTGTCAGGAAGTGGGACCTAATGGCATTGTTTTTAAATGGAAGAAGCAAGAGCAGATTGTGCTTAGGTCATAAGAGTATGTATGCTACAAGCTCTGAAGCACTGAATAATTAATTGTTAGTTTGGCAGTTTGGGCAGAAAAATGGTTCTCCTGCTCCCCTGACCCCTTCTACTTCTTCATTTTGTACCTGACCTGGAACCTGCTATAGACTAGGCTGGCCTTGAACTCCTGCCTTGGCTTCAGTGCTGGGTTTAAAGCTGTGTACCATCACCTGTCCTGTTCTTCAGCTCTTGAAAGGAAGAAAGAATGAAAGCCATGCTCACCAGTGCTGGGTACTGAAGATGTTCGTTAGCTTTGTTAGTGTAGAGCCAGCTATGCTAACAAGTCCCTAGTCCTTCACCAGAGGTCAAAACTAGCTTCAGTTTGGGTCTTTTAGAGAAAACACCCTCACAATCAAAGGAAGTGCCAGCACTAAATGCAGCTCCTTAAGTGAAATGTTATCAGAGGGTTGCACTCTATCATTAATATAGGGGTGTTCTCTTGAGGGCCCCCAGCCTGTAAGGATGGCCTGGTTCTATTTCAAAGAGTGGTTCTTGGGTCTTGAAAGAGAAAGTTATAGAGAAATATTTCACCAGTTTCTTGGCTAAATCCAAGACCAACCTTTTCTGGGAGCTTCCATTGGTTCATGTTCAGTTTTGACACTTGGATCCTCACTAGGGACAGCTCCTAGGTGTGACTTAGAAGCTGGAGTTGGTCAGAGTTGAAAGGTACCTGTTAACCTGATTCTGTGGCAGGCTGGAAGCAAGTGTTTTTGGAATTTTTACCTTTATCCTATATATCCCAAGATTGGATAGGCACTCACTTGCTTCCCTGCCTGTACACCATCTTCACACTTTATCCAGCACTCCCATCTGAAGTACAGACCTTCCATTTGTGCATAGTCATATACTCTGGCCTATCTGGCCTATCCCTGGAGTGCTTACTGACTCCTTAATTTGTTTACCAGCCTGCCAGTGTTACTTGCTGTGTCCATTTCTGCTAACATCTGTCAAAAGCCTGCTGTGTGCCTAGCCTTGTGCTGGTCTTAGAGACACGGAGGCAAGTAAGACATGGTTCTTCCTTCATACATAGATAAATCATAGATACCATGATACGCACCATGATCCCTGCCAGTGCAGAATCCTCTGTAGAGACTTGGAGGAGAAGCATGTAAATTCATTTTCGAAGTAAGGGGAGGCCACTCCTGGAGGTAATAACTGGGCCAGATTTTAGAAGAACAAAAAGCAGTTTGTCTAGGTAGGAAGAGGGAGTAGGACAGAGGTGATGGACTTGAAGGGGTTACCGGTATTCCCATACACCACTTTTACACACACATGCACTATGTGGTGGAGTCTTTTTAAGAATTTAGCAGACTTCCGCCTGTGTGTTTGGAGAAAAAGAGGAACAGTTCAGAAAGTGTAAGCTGGTGTGCTTGCTTATCTGAACCTAGAGGGTGTTCCTCTGAAGGAGTATAGATGGTAAGTTTAGCTGAGTTTCATCAGGTGTGCTTCTTACAGACTTATTTTAAAGAAATGAAAGCCAGATATTTATTGTGCTCAACCAAGGGGTTGGGGATGTTTTTTTCTTTTTGTTTGTTTGTTTGTTTTGAGGAAGAGAGACTAGGGTTCAGTCAGTTACATGCTTTCCATACAAGGGTGAAGATTGGAGTTCATGTCCCCAGCACTCATGTAAATGCTGGGCATGGTACATGGCAACCCCAGCTCGTGCATTTAGACAGGCAGATCCCTGGTGCTCGTTGGCGAGCCAGCTGAGTTGAAAGGATGAGCTGCAGAGACTGTGTCTCAAGGAAATAAGGCACACAAGAGGGGCCCACACCTTTCATTAATCCCAACACTTGGAAGGCAGGTGGATCTACATAGTGAGTTTCAGGCCAGTCAAGGCTATACAGAGTGAGACGTTGTCTCAAAACAAAACAAAACAAAACAAAACAGAACAAATCTCAAAAAATAAAGTGGAGAACAGTCAAGGAAGTTAACTATGTCTGACTTCTACACCTACACGAACCTGTACGTACATGTACACACATGTCCTGGAAATAGACACTATTTATCTCGATGAGAGGTGGTATGTTAGCCTTCATCATGGCACTTGCCTAAAATGTCAAGTCTGTTCTTACCCCAATGAAGACGATCTCGTTTATATAGTATTTGACTATTTAGTTGGGGTATCTTGGCCACAACAGAAGTTTTTGAGACATCGGGGATAAAGTACTTGGCCATGGATATTTGTACATATCAGGAAGGGATACCTAAAGACAGAATTCTAAGGAATCCTGGCATTTAAAAGGCCAGTTAGTGGGGCATAGTGGCACATGCCTTCAGTCCTAGCACCCAGAAAGTTATAGGCAGGCAATCTGTGTGGGTTTGAGGCCATCGTGGTCTATATAGAGAGTTTTAGGCCACCTAGCCTACATAGGGAAACCATGTCTGGAAATAATAAATATAAGAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCTCAGCTCTGGAAAAAAAAAAATAAGAGCAGCCTTTAAAAAAATAATCCTTCATTAGAGCATAAAAAATAATTGCCCGGATTATATGAAAACTAATGCTGATTTATCATGGGAGTACAAGAGAGTGGCAGGATAAGAAGTATTGTGTTACGCTGAATGCTATAGAGGGCCAGGTGAGCTGAAGAGGGTGGTGTAGTCAGTCCTTGTCTTGCAACCCAGGGTTCTGAAGATAAGTGTTCAATAAACAAGAAAGAGAAGATTTCACTGGAAGAGAGACACTTGTGGATAAGAAGGTTCAGTCATGCTGCTCTTCTTTCCCCAAGGGACATGAAGGGGACATTCAGAGAACCCATGTGGTAGAGAGACAACCAACAAGTTGTTCTCTGACCTGCATATGCATGCCTAAAATAAGTAAGCATAATTAATAAAAGTCAAGATGTGTCAGATGCCATATCATATTCACCTGCTCACCTCATTGGCTTTCACTGGGAGGGACGTGCCTTGGAGACAGAGATGATTCAGCCAGCATCCCAACTCAGATGAGGGAGAGGCAGAAATGCTGTGGTCTCAAGACATCTTAGGATCCAAGAAGCTGCAGTTGCAGTACTGCAGTGTAGGTTTTCTGGGGATAGGAAGGAATAGAGAACTAGCTTGACCGAAGGACTAGCTTGTTTAGAGGACAGCCCTTCTTGGGTCAGCAAACCATCCCATACCATTTTACCTAACAGCCCTGGAAGTGACCTTCCAGGGGCAAACCCACTCAGAGCCCTTGCTAGGAGACTGATCGAACTGTTCCTTTGGGACTTGTAGACTCTTCTCAAGAAACGATGCTTTCTAGGTCTGAGAAGCCAGAATTGTGTTAGAAGGTTAGGCTCTGAAAGAGACAGCTTTGGAAAATCCTGCCTGTCACTTCAGTCTCCTTATTTGTAAATGGCACAAAAACTGCCAGCACTGTTGTGAAGGCCAGTGAGAGACACAAGAACAGGTATATTTGACATGGCATCTGACCATGTTTTTGTTTTTAATTAATTATATTTTTATTTTAGGTATGCATGTAGAGGACAGAGTACAACTTAAAAGAGTTGGTTCTCAGCCACGTATAGCGCCCACACCTTGATCCCACCACTCCAGAGGCAGAAACAGGCAGATCTCTGAGTTTGAGGCCAACCTGGTCTTCAGAGAGAAAGTTCCAGGACAGATAGGACTACATAGAGAGAAACCCTGTCTCAATAAAAAAGAAAAGAGAAAAGGGGGATGGGGGGGGAAGAGAATGGAGAGGGAGAGGAGANNNNNNNNNNNNNNNNNNNNNNNNNCCTCTTTCAGGCCATGAGGGGACTTGGAAATTACGAGTGTCTTGAAACAGGGGAAGGTGCCAGGCTTATTATTAGATGCCCACGGTTCTGCCAGTGGTCGACTATCCTCAAGCTCAACCTAATCCGAACAAACAGGTTTTTCTGGATTTTATTTGTTATTTTATGTGTATAGTGGTCGTCTGAATGCATATATGTGGTACATGTGTCGGTTCCAGTCGCTCTTGAGTCCAAGAAGGGAAAGCCATAAATCCCCTTTGGGACTTAAGATATAGGACATGTTGTTGGGCTGCTATATGCTTGCTGGGATGGAACTTGAGTCCCTCTGGAAGTGTTCTCCAGTGTTCTAACCCAAGAGGCATCTCTTTCAGTCCCCCAACAACAATCTTAATTGTTTATATACTACTTAGGTGCTAATGGTTCGATTCCTCACATTTGCTGTGGGATTTACAGGAAAAAACCAGAACCCTGCAAAACAGTTAAGTGACCTTGCCTAATGGACACAGATAAGGAAGGATTATTTGTTTAGGGCTCTCAAGTTTCCAACGAACACAAGGAAGGAAATTGTGTCGTTTTTCCCTTCACTCCAGGATTACCTAACAGGTGGGAACGCCATGGTGGTTCGATGAGATGAAAGCCATGAACAAGTTCTTTCCATACTTTGTTTCTAATAGGCCCCGAGGGAAAGCCCACCCCCCATCACCTCACCACCCATTGGCTTTACCCACAATTTTTCATATTGCATTCTCTTCTTAAAGTGGCTTTGGGACTCCAAACTTGGGTTGACTCTCAGTACCAATTCTCAGGTAGAGGAAGAGGGTACAGGGGACCTGGGAGACTGGATGGATCCTCAAACTCAAAGGATTTTCTGTTGGACAAGAGCCAGGAGTATTTTGGGCTTGGGGACCAGATCATTGCCTGTGGTTGCTGGGATAGTAATTGGTTAAAGAACGGCAGAGGCCCTGGCTCCTTGATCACCTGTTTACCCTACCTCCGAGTGAGTGGACAGATGGGTCTGAAGGGACAGTAATAAACTCCCCAAATTCAAAAAACCCCCTACGGGGCTATGAGGATGATAACTTGGCGAGGGAAAGGGCACTTTGCCACCAAAGCCTGGATAAAGCCCTTTGAGTTCCATCCTCTAGGACTCACCTGTCGGCTACAACACGAGAGGCCAAACCTCTCCTCTCCTCTCCTCTCCTCCTCTTCCTTCCTCTCCTCCTCCTCTCCTTCCTCTCCCTTCCTCTCCTCTTCCCTCCCCCTCCTTTTCCCTTCTCTCCTTTCCCTTCCTTCTCTTCTCCCCTTCCTCTTCTATCCCTCTTTTCCTTCCTCTCCCCTCCTCTCTCTCCCTTCCTTCCCTCTCCATTCTCTTCCCCCATTCCCCCTTTTCCTCTTTTCTTTTTTATTGAAGACAGGGTTTCTCTCTAGTGTTCCTATCTGTCCTGGAAACCTTTCATCTCTGGAAGACCAGGCGTTGGCTCAAACTCAGAGGTTTCTGCTGTTTCTGCCTCTGGGGAGTGGTGGGATCAGAGGTGTGGGCGCTATACGGGCTGAGAAACCAACTCTTTTAAGTTGTACTCTGTCCTCTAATGCATTACCTAAAATAAAATATTAATTAATTAAAAACAAAAAACATTGGTCAGATGCCATCGATCAAATATAACCTGTTTTCTTGTGTCTCTCACTGCCTTCCCACAACCGTGCTGGCAGTTTTTGTGCCCATTACCAAAATTAAGGAGGACTGAACGTGACCAGGCAGATTTCAAAGCTGTCTCTTCAGAGCCTAACCTTCTAACACCACATTTCTGGGCTTCTCCCAGACCTAGAAGCCATGTTCTTGAGAAAGAGTCTTACAAGTCCCCAAAAGGGAACAAAGGTTCGATCAGTCCTCCTAGCAAGGGCTCTGGAAGTGGGGGTTTGCCCCCTGGAGGTCACTTCCAGGGCTGTTAGGGTAAAAAATGGTTATGGGATTGGGTTTTGGCTGACCCATACCATTTTACCTAAACAAGCCTGGAAGTGGACCTTCCCAGGGGGGGCCAAACCCACTCAGAGGGCCCTTGCTACGGGAGACTGATCGAACTTGTTCCTTTGGGACTTGGTAACTTCTTTCTCAAGAAACGATGCTTTCTAGGGTCTGGAGACAGCCAGAATTTGTGGGTTAGGGAAAAGGTTGGGGGCTCTGGAAAGAGGAACATGCTTTGGAAAATCCTGCCTTGTCACTTCAGTTCCTTATTTGTAAATGGCACAAAAAACTGCCAGCCCACTGTTGTGAAAGGCCAGTTGAGAGACCACAAAGAACGGTCTATTTGACATGGCATCCTGGGACCCATGTTTTATGTTTTTAATTAATTTATATTTTTATTTTAGTATGCATTTGTTAGGAGGACAGGAGTACAACCTTAAAAGAGGTTGGTTTCTCAGGCCACGTATAGCGCCCACCACCCTTGATCCCACCACTCCAGAGGCGAAAACAGGCAGATCTCTGAAGTTTTGAGGGCCAACCCCTGGGTCTTCAGGAGAGAAAGGTTCCAGAGGACAGATAGCACATAGAGAGAAACCCTGTCTCAATACACAAAAGAAAAAGGAAAAGGGGATGGGGGGAAGAGAATGGAAGGAGAGGAGAGGGAGAGAGAGGAGGGAAGAAGAGGAGAAGAGAGGGGATAGACAGAGGGAGGAGAAGAGGAAGGAAAGGGAAAAAGAGGAGGAGAGGAAAAGGAAGAGGAGAGAGGAGAGGAAGAGAGGAGAGGAGAGGAGAGAGAGGAGGAAGAGAGAGGAGAGGAGAGGGGAGAGGACGAGGTTTGGGCTCTCTGTGTACCACCATTTTCATGAGTCCTAAGGATTGAACTCAGGCTATCAGGCTTGGTGGCAAGTGCCTTTTCCTGCCAAGTTATCATCTCACTAGCCCCGAGGGGGTGTTTTTGAATTTGGGAGTTATTACTTCCCTTCAGACCATCTGTCACTCACTCGGAGTAGGGTAACAGGTTCAAGGAGCAGGGCCTCTGCTCTTTACCATTACTACTCCCAGCAACACAGAATGATCTGGTCCAGCCAAATGACTCTTGCTCTTGTCCACAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCTACTGAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATGCATATGAAGATATTGTGGGTAAGCAATGGTGGAGGTGATGGGGGTGGGCCTTCCCTCGGGGCTATAGAACAAGTACTGGAAGAAATGTTCATGGCTCATCTCATACGGAACACCATGGTTCCACCTTAGGTAATTCCTGAGTGAAGGGACAAACGACACAATTCCTTTCTTGTGTTCTTGGAAGACTTGAGAGCCTAACAATACTCTTCCTTAGCTGTGTCATTAGGCAAGTCACTTAACTGTTGCAGGGTTCTGTTTTTCTGTAAATCCACAGCAATGTGAGAATACGAACATTAGCACTAGTAGTAATAACAATTAAGATTGTTGTTGGGGGACTGAAGAGATGCCTCTTGGTTAGAACACTGGAGACACTTCCAGAGGACTCAAGTTCCATTCCCAGCAAGCATATAGCAGCCACAACTGTCTATATCTTAAGTCCCAAGGGATCTTATGCTTTCTTCTGGCCTCAAGGAGCACTGAACACACATGGTACACATATATGCATTCAGACAAGCACTTATACACATAAAATACAAATAAAATCTCAGAAAAACTGTTGTTCGGATTAGGTGAGCTGAGGATACGACACTGGCAGACGTGGCATCTAATATAAGCCTGCTTCCTGTTTCAAAGACATCTGTAATTTCCCAGTGTCCTCTCATGGCTGAAGAGGTGAGGGAGCTCAGTAGAACTCCATTTATGGGGCAACTAATTCTCTATGAGAACTCTGCCTTCTTGACCTAATTCCCTTCCAGAGACCCAATCAGGGCTTTCTGATAATAAGTTTGAGGAGACACAGATATTCAGATGTATAGCCAGTTTCATAGATTCTAGAAAAAGATGGGATTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAGAGGCCTTGGTAGAGGCTTCAAACACTGAGTCTGTGTCTCCACATTTTGGAGATACTGGGTTTTTTTCAAGGACTTCTAGTAAACCTGCTCAATCTTTGCCCTACAAAAACAATTTCTGGTCAGAAAACAGATTGCCTCTGGGTGGGCCGTAGATGCTATCTTTACCTTCCAGGGCTGTATTCTATACAAACACCTGAAGAGTACAGTTTGGCAGCATTCATTCTCCTACCCTGCAGAAGTACTGTTACCATTCTGCCTTGCAAGGAAGTAAGCATGATATTAGCGGGACTGATTTCAAGGACCTACAAAGGAGTAGAGTACACAGTCCTGTGTTTGGTTTATTTTGGGTATTTTTATCTGTTTTGAGATAAATCTTTTGCTATGCAGCCCAGGTTAGCCTAGAACTCTAAATTATTCTGCCTCGCCTTTCAAGTACCAGGATTACAGGTCTGTGCTACCATCTGACTACTTTCGATACTCGTTTTAGTTTTATCCTTATCTTCTTCAGGGGACCTTTGATTCTGTGCAAAATGTGTCTCTGAATAGATCAACAAAGCAGGGAGATGCACTGTGCCATCCTCATTTTAGGGTCATCTTGTTCATCTCCAGCCTTGAATTAGGAGAACACGGTCTTAATTAACATGAGCAAGAGTAGTGGCCACAGTAGAGAGAACCTTTCAGATTCTTAGGCTAAGAGAATCTTATGAAGAAGGGGTCATCTGCTTTCCCATGTGCATGTTTAGTGCTTGTGGAAGTCTGAAGAGGGCATTAGATTCCCTGCTGGGAACTGAACTCTTGTTCTCTGAAAAAGCAGCAAGAGCTCTTAACCACTGAGCTATTTCACTAACCTGTGATTTCTCTACCAGTCACTGAGCTAGTGCTTTTTGCCACATTTAGACCCATAGACATACTGCTGTCTAGGTATGGGGCATATAGCGTGTCTCCATGCAAATGTGCACTGTAGCAGTGAGACTGTAGGAACAAGGGCCTCTGACAACAGGAGACTGGGGATAGATGCCTTTCTCTAACTGCTTGTGAAATGACAGCTCTGTATTCAGAGGAGCTGTGGGGATCAGAGCCAAAGATCCAGAATCAAGGTGAGCAGTTAAGAAAGATGCTTCAGTATACACTCTGCTTTGTACAACTTTCATCTCCAGCTAATCTTCCAGAGACACACCCACCCTGCTCTGTGTGCTCTCACACAGATACAGTGTCGCAGAGTAGAAGAAAATTTCTAATGAGTAAGAAGACAGCTCTGCTGCTTCATCTTTCCCATCCTTCAGCCTCCTATTACAGAGTCTTTTCCAGTTGGCAGATAATGTAATGTTCTCATTACTGCTCAGGGCTCTTGGGACTATCTACCGTGACTGCTATATGTTGGCAGGAAGCTGTAGTTTTTCTACAATCCCTGTAGCACAGCTGGCAGGAAGGACTGATCATTACTGTGTTCTTACAAGGCTTAGGAGGCCATTCTGTGCTGCCCAAATATTCCAGGGGTAGATGTATTTTTATAGCAACTAAACTATCAGGAGACAAGACCCCCCCCACTCCCACCCCATCACACACACACACACACACACACACACACACACACACACACACACACACACACACACGCCAGTTCATGAGTCAAGACTCTGGAAGGGAATTTTTTAGAGGCACTATCCTGGGTACAGAGCTATTTCCTGGGCCTTCTTAGGAAAGGGGAGGATATCTGCTTCTCATTTGTTAAGGAGACTCTTTTCTACTTTGGAAAGTATATGAAGAGACAAGAAATGTGGAAGCAGCTTGGTTGCTTCTTGGATGGATGAGGTGAAACTAGGGGGAAGCACTGTACATGGTAAAGTTGGGGTTAGGCATCTTCCTAATCACTCACCCAACTTTTGGATTCCTGGGTCCTTGGGAAGAAAAATGGGGGAGGATATAAGGAAGAGGGTAAGACAGTGACCAAGCACTGATTTGGGTGCTTGTGGTTTGCAAGTTGGGGTAGAAGTAGCTTTGAGAGTTTGTTAGGACAATACATCTCCCACAGCAGTTCAGTCTGAATCTTATGACCTAACCAGAGAAGCTAGAAGAAAAAGTATAAGGGAGGAGAGCCCTGTTAGATTCTGGTTGGTTTTCCCTCCACTTTCTTCTTTCTTCAAAGAGATTCATAAATGTGAACTCTTAGAGCCTTCCAGGGCTCTCTTGTTGTTCAACTTTGAAGGTCATTTTCATTTTCTTGTCTAGGATTGATCAGTGGCTCTGACTTCTAGTTCTCACCTAGCCTCTCTCTGCCTTGGGGTATTAAGACTGTTTCTGGTTCCAACTGGATTTTCCAGCTTTGTGGTACTTCAGGTCAACTGTGATAAAATAAGCTTTGTTCTGGGCCTGTGACGATGGATCTTGTAAGGGAAGCAGAGAGTTCCTATGCTAAGTCTCCATCATGGGTGCATTCCTTTGGGCTGGTGTTCCTGGACTGTTAGAGGTTGTAGCCCATTGTTCCAGAGGCGAATAGGCCATCTCTGTTAGAAGCAGACATGAGCAAGGCACTTGAGAGAATTTACTGGCCTCCTGCCCATATCAGGCACACAGCCTGAAGAGTACAGGGTGGTATTCTCCAGAAAGGCTGAGATTTCAAAGCCTGCCAATTTGCAATAGTAAGGATCAAAAAGAAAGTTGTTTCCCTGCTGCTTTCTAAAGCTGTTCGTTTTTGTCTATCTGACCAGAAGATGCTGCTGTTCTACAGTGGCAGCGAATTCTGAGCCTGACAATGAAAATGCACCTTAGGAAGCAGCTTGCTAAGGGATCGTGTAGAGTGGCATCTGCCTGATCAAGGAGCCTGGGCTACATTCCTGCTGTGATTTCCACTCCTATCAGTTAGCTTGAGAGCTGCCAGGGCATCTGAATGTCAGTGGGATACAAGTCAGAACAGGTTTTGCCAGTAAAGCCTCTTCAGTTTCTATTTCACTTTTCTCATTCACCCAGGCTGGGCAACAGAGAGAAACAGAGGGACCTACAAGCATGGATGCAGAACAGCCAAGAGCTGTAGCCTAGGGATTGTTCCCAGGGCTGTTGGAAATGAGGGTAATAGCAGTCCCCAAGGGAAGTGGCCCCCAGCCTGGCCCTTTTCCCTCCTGTATAAGGAAGTGAGAAAGGCGGAGACCCAGGAGAAACAGTCAGTTGGAGCCAGAGGATTTCGAGGAAGGGGAGCTAGCCTTAGTTATCTGTGCAGCCCAGGAAGTTTGAAGTGTTATGGGTACTTTGGATAGATGCACTCCTTTCGAAACTGTTATTGTAGTTTATGAATGAGTGGGGAATAAAGAAGGCAGTTTTCCTGTGTGGCAGCCAAAAGAGCTGTAGGAAGGAGTGGGAGTCGGACCTGATGGAGCAGGAGTCTTCTAGAAGGATCAGTATGCTGAGACTGGGCTCTGGTAAGCCTCTTTCAGCAGAGTGCAAAGCAGAAGTCACTGGGGGGGGGGGTGGGGGGGTGCCTGTGGCCCTTACCTTGTCAGCAAAGCTGGGAAAGGTTGAGACCTCTGCTTTCCCAAGCCAAGCTTGATGAGATGAGGCTGCACAGAGCCAGCCTTGGCTTACCACTCTGTTACCCTGTAAATGCTGGGCAGGCTGTCCTGGGGGAACCATGCAGGCAGAGTTGCAAGTGAAAGGTATGCAGTCTGTCTAAATCCCAGTCTCAACAAAAGTACCAGGCAAATTGTCACCTTATTCCTCCATTCAGCTCTGGCCTCCCACTTTCACTGTGGTGTACTCTGAGCACTATGTCCCACTTGCTCCCCCCCCCCCAGCAAATTCAGTTTATTGGCTCTAGAATTCACTGTCTTTTTGCTCTTTGCCCATCCATACTTGTAGGCATCTTTGCTGCCTGCAGAGATGACTGGGAGTCCCAGGAGCATACGATAATGGACTTGGACTGATCCGATCGGGGCCAGCTAAGGCTGAGAAGCAGAGCATGATGATTACGGGTTACTTAGGTTAGAGAGGAAGCTGGCACTAGAGTGGGCAGGAGGTGTCAGTACATTCATACTTCCACAGAGGCAGTTCAGCACACACAAGTTGGTACCTTCCAACTGTCCTTCCCAAGGTAGTCGTCAACGCAGCCATGTCTGCTTCTGCTGCTTCTCTGGAATTCATCTTACACGTTTTTCTTGGAGCTTTAGATTCTACATCAATTGTCCAAGCTCTGATTCTGCGAAAAGAAGGAAGGAAAAAGAGAAGAAGATGAAGGAAAAAAGGAATTAGACTTAAGGGCTCACAGCATGGCCCCAGACACTATGAGGAAGCATCAGATATAGGGGTCAGGGAGCAGTTCCACTCTTTGCTTTGCTGTGCCCATCCTCCTCCCATCCCCCCTCTGTTCTTCCTTTCCTCCCCATCCCAGGGGGCATTTGATAACATGTAATGTCAGGATAGTATTGAAAGGCCAGAATTGCAGTAAATGTCCTGTAAATGGTCAGGTCAGTTCCTCAACCCAAAATGTCAACTGCTCCGAGAACCTTTGGTGGAAAGGGATTGGGATGGATTTTCTTATAAGTTGGAGATAATGAGGACTCTGGCCAGTCACTTAGTCCAAGACAGTGTGAATGAGTGTAAAATAAATATAAACAAATATTTCTCTAGCCCCAATCTGGAAAGTAAAACACATGTCCTGTGTTACAGATCAGAAGAGTAGTTATGCCCTAGCATTCTTCTATTCTGTATCCCCTTCCTCTCTCAACCTCGTAAGGTATTTATTAGGTAGGGACCAAGAAGTAGCAAACCCACCCACCTCCCTCAGAAATATACCTCACTTGAAGTGGGCTGGAAAAACGTGCAGGGGATGCCGGGTTTGAGACTTGCTTCTCCAGACAGGGCTGCTGCGCCAACTTTACTTAGTCAGGGCCCTGGAATGGAGAAGAGTCATTTTAATGGCATGGCTGTTATAGGAAAAGCTGTGCTCCATCGCTGGGGAGCATGTTGTGTTGGGAATCGCTTAATCCAACCCCAACTCTTTTCTTGACTCATCCTTGACTCATAAGATTACAGAGACTGGCATTGCTTCTGCTGCAGTCTGTATCCTCACTCCCACCTCCACAAAGGCATTTCCTAAAGTCCTTGTGGTTTCTTATTTAATTAATAGATGCTTCAGTGTAGGAGAGCCTCAGCTTTTTGAGGAATTGCTAAGCATGCTGGGATTGCATTTTCTTCTGCAGTCCCAGCAGCCTCTATTTTTAGTCTGGTAGAAGTTGGGGTAAGATGCATACAGGTATTGGCAGGGTAGCCATGGGGCTCAGCATTTGCCCAAACTCAGTCCTGTTCACACATCCTTTCCTGGGCACACTATCTGCCACATAAGTCCCAAACAGTAGCATTGAGTCTGGGGTAAGAAAACAGAAAGACAAGGGAAGGGAAGGGAGGGTTGTATTGGTAAGGAGTCTCTGGATCTTGTTACCACCATGATTTCACTGCTGGGATTAAGCCTAGACTGATGAAGCAACATGACTCCTTGGTATTACTGTGTGTTAGAAAAGCCTCATTGGGGCTGAGAGATGCCTCAGAGGTTAAGAGCACTGACTGCTTTGCAGAGGTCCTGAGTTCAATTCCCAGCAACCATATGGTGGTAGCTTATGACCATCTGTAATGGAATCCAATGCCTTCTTCTGGTGTGTCTGAAGGCAGCTACAGTGTACTCACATACATGGAAGGAAGGAAGGGAGGGAGGGAGGGGGAGGGAGGAGGGAAAGAGAGGGGGGAAGGGGGAGCAAGGAAGGAAGAAATAAAGCAGGCCTCATTGGAGGTTCAGGAAGGTGTAACTTAGAAAAAGATGGATCTCAAAAACCTTATAGTCTTGGGCAAGAACTATGTTTGGGGCTTTCCTAAGATTTTCTGGTAGTGTCAATACAGAGCATACTGCCAGAGATTTTAGAAACTGGTCCTGAGATGCAAGAACTCTCCTCCTTTCTTTTGCCCTGGACCCCTTCCAAGCCTTTCACACTCCCATGTGTCACTGTGGAAAAGCCTCTGCCAAATGGGGAATGATGAGGACTCTCTCTCTGCCGAGGTTACCAGTAGAGATGGTAGCTGATACTATGCTGAGAGAGAAGAATGGAAGAGTGTCACTGAGCACCCACTGTGGCTGGTTGGCCCCCTGGTTGCCTGAGACAATTCCTCTTCCTGAAAGACTTGGAGAGCACAGGAGTAGGTCTGAGGAGGATCTAGCAAAGCTCTGCTCCCTAGAGTTCTTTGAGTTCTGTCATGCTTGCCCCTGAAACTGGCCCCAGAGAGACCCACAGAGAGTCGAGGTATAGCTATGGGATCTCTGAAAGTCTTTCCAGAAGCCAGTCTCCGGGGGCTTTACCAGCTGAAGGGTTAGAGCCAGGGAAACTTGTAATGTCAGCCTTGTCCTCTGCCAGTCTTGTGTAATCCCTAAATGTATAAAGCAGTGGCCAGACAAGGCTGAGCTGAGCTGAGCTGGAGGTAGGGAGTGGGGGCCTCAGCTTCTGGACTTGGAGCCAGGATCTGTTTGTAGCCTTCCCACTGCAGACCGGCTGCTGCATGACTCACGAGCTGAAGGGCCAGGCGGGAGATACTCTGGTCACAGGGATTGTGTGTACCTCTCACTCTCTCATTC
Seq C2 exon
TTTCCTTCTCTTCTCCAACGTTGCCTCCTCTGCAGGAGGGCTTCCCAAGGAGAATCCCTATGAGGATGTGGACTTAAAGAACCGAAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCCCTGGACTCTTTGCACAGGATGTGGAGTCCTCAAGACAGGAAGTACAACAACCCACCCATGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000013934:ENSRNOT00000064902:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.778 A=NA C2=1.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Mouse
(mm10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]