ENSBTAG00000008946 @ bosTau6

Biotype

protein_coding

Gene Symbol

CAPN13

Description

calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]

Coordinates

chr11:69045268-69128762:+

Assembly

bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

BtaALTA0005578-1/2

Alternative 3'ss

0

NA

+

10.35

27.06

0

BtaALTA0005578-2/2

Alternative 3'ss

6

chr11:69122586-69122591

+

89.65

27.06

0

BtaALTD0004172-1/2

Alternative 5'ss

0

NA

+

15.54

29.74

0

BtaALTD0004172-2/2

Alternative 5'ss

221

chr11:69125919-69126139

+

84.45

29.74

0

BtaEX0006984

Exon Skipping

75

chr11:69106522-69106596

+

97.13

11.49

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000162949	CAPN13	1-to-1
Human	hg19	ENSG00000162949	CAPN13	1-to-1
Mouse	mm10	ENSMUSG00000043705	Capn13	1-to-1
Mouse	mm9	ENSMUSG00000043705	Capn13	1-to-1
Rat	rn6	ENSRNOG00000032375	Capn13	1-to-1
Chicken	galGal4	ENSGALG00000020084	CAPN13	1-to-1
Chicken	galGal3	ENSGALG00000020084	CAPN13	1-to-1
Zebrafish	danRer10	ENSDARG00000008553	zgc:136872	2-to-2
Zebrafish	danRer10	ENSDARG00000052917	si:ch211-202f3.3	2-to-2