Special

ENSMUSG00000043705 @ mm10

Biotype
protein_coding
Gene Symbol
Capn13
Description
calpain 13 [Source:MGI Symbol;Acc:MGI:2685789]
Coordinates
chr17:73306464-73399296:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
137
chr17:73360395-73360531
-
93.21
22.01
0
Exon Skipping
146
chr17:73339342-73339487
-
97.28
19.91
0
Exon Skipping
59
chr17:73326324-73326382
-
94.06
11.11
0
Intron Retention
1486
chr17:73324838-73326323
-
17.19
30.33
0
Intron Retention
3989
chr17:73341150-73345138
-
3.45
20
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000162949 CAPN13 1-to-1
Human hg19 ENSG00000162949 CAPN13 1-to-1
Rat rn6 ENSRNOG00000032375 Capn13 1-to-1
Cow bosTau6 ENSBTAG00000008946 CAPN13 1-to-1
Chicken galGal4 ENSGALG00000020084 CAPN13 1-to-1
Chicken galGal3 ENSGALG00000020084 CAPN13 1-to-1
Zebrafish danRer10 ENSDARG00000008553 zgc:136872 1-to-4
Zebrafish danRer10 ENSDARG00000052917 si:ch211-202f3.3 1-to-4
Zebrafish danRer10 ENSDARG00000077217 zgc:162184 1-to-4
Zebrafish danRer10 ENSDARG00000091723 si:ch211-202f3.4 1-to-4