Special

ENSG00000072864 @ hg38

Biotype
protein_coding
Gene Symbol
NDE1
Description
nudE neurodevelopment protein 1 [Source:HGNC Symbol;Acc:HGNC:17619]
Coordinates
chr16:15643267-15726353:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
4.66
100
0
Alternative 3'ss
3
chr16:15677801-15677803
+
95.34
100
0
Alternative 3'ss
0
NA
+
79.02
52.51
0
Alternative 3'ss
132
chr16:15699597-15699728
+
20.98
52.51
0
Alternative 5'ss
0
NA
+
81.41
35.31
0
Alternative 5'ss
200
chr16:15672772-15672971
+
18.59
35.31
0
Exon Skipping
152
chr16:15696709-15696860
+
88.29
100
0
Exon Skipping
82
chr16:15672690-15672771
+
2.56
39.35
0
Exon Skipping
137
chr16:15687375-15687511
+
98.65
60.76
0
Exon Skipping
180
chr16:15691144-15691323
+
98.63
100
0
Intron Retention
27330
chr16:15696861-15724190
+
8.07
32.2
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000022678 Nde1 1-to-1
Mouse mm9 ENSMUSG00000022678 Nde1 1-to-1
Rat rn6 ENSRNOG00000058007 Nde1 1-to-1
Cow bosTau6 ENSBTAG00000015986 NDE1 1-to-1
Chicken galGal4 ENSGALG00000006500 NDE1 1-to-1
Chicken galGal3 ENSGALG00000006500 NDE1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000103902 nde1 1-to-1
Fruitfly dm6 FBgn0036059 nudE 2-to-1
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