Special

ENSG00000121390 @ hg19

Biotype
protein_coding
Gene Symbol
PSPC1
Description
paraspeckle component 1 [Source:HGNC Symbol;Acc:20320]
Coordinates
chr13:20248896-20357142:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
69
chr13:20249056-20249124
-
89.15
25.14
0
Exon Skipping
58
chr13:20283682-20283739
-
66.55
71.44
0
Exon Skipping
170
chr13:20279802-20279971
-
54.23
72.16
0
Exon Skipping
19
chr13:20273520-20273538
-
5.3
38.47
0
Intron Retention
52415
chr13:20251964-20304378
-
10.91
50
0
Intron Retention
2739
chr13:20249125-20251863
-
49.67
85.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021938 Pspc1 1-to-1
Mouse mm9 ENSMUSG00000021938 Pspc1 1-to-1
Rat rn6 ENSRNOG00000020782 Pspc1 1-to-1
Cow bosTau6 ENSBTAG00000003934 PSPC1 1-to-1
Chicken galGal4 ENSGALG00000017142 PSPC1 1-to-1
Chicken galGal3 ENSGALG00000017142 PSPC1 1-to-1
Zebrafish danRer10 ENSDARG00000006621 pspc1 1-to-1
Fruitfly dm6 FBgn0004227 nonA 3-to-2
Fruitfly dm6 FBgn0015520 nonA-l 3-to-2