Special

ENSG00000121390 @ hg38

Biotype
protein_coding
Gene Symbol
PSPC1
Description
paraspeckle component 1 [Source:HGNC Symbol;Acc:HGNC:20320]
Coordinates
chr13:19674752-19783019:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
69
chr13:19674916-19674984
-
90.98
24
0
Exon Skipping
58
chr13:19709542-19709599
-
65.85
85.3
0
Exon Skipping
170
chr13:19705662-19705831
-
52.82
85.4
0
Exon Skipping
19
chr13:19699380-19699398
-
5.78
59.63
0
Exon Skipping
21
chr13:19728365-19728385
-
0.94
26.48
0
Intron Retention
52415
chr13:19677824-19730238
-
17.34
73.75
0
Intron Retention
2739
chr13:19674985-19677723
-
45.01
93.8
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021938 Pspc1 1-to-1
Mouse mm9 ENSMUSG00000021938 Pspc1 1-to-1
Rat rn6 ENSRNOG00000020782 Pspc1 1-to-1
Cow bosTau6 ENSBTAG00000003934 PSPC1 1-to-1
Chicken galGal4 ENSGALG00000017142 PSPC1 1-to-1
Chicken galGal3 ENSGALG00000017142 PSPC1 1-to-1
Zebrafish danRer10 ENSDARG00000006621 pspc1 1-to-1
Fruitfly dm6 FBgn0004227 nonA 3-to-2
Fruitfly dm6 FBgn0015520 nonA-l 3-to-2