Special

ENSGALG00000017142 @ galGal4

Biotype
protein_coding
Gene Symbol
PSPC1
Description
Paraspeckle component 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5ZK88]
Coordinates
chr1:178404300-178443186:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
58
chr1:178435123-178435180
+
79.66
56.41
0
Exon Skipping
197
chr1:178411036-178411232
+
91.85
64.81
0
Exon Skipping
249
chr1:178458638-178458886
+
22.55
42.42
0
Exon Skipping
104
chr1:178461814-178461917
+
95.29
57.66
0
Exon Skipping
83
chr1:178465310-178465392
+
95.59
62.34
0
Exon Skipping
126
chr1:178465643-178465768
+
95.81
66.67
0
Intron Retention
18240
chr1:178416883-178435122
+
18.34
72.2
0
Intron Retention
4182
chr1:178435181-178439362
+
12.48
66.94
0
Intron Retention
3184
chr1:178439533-178442716
+
21.15
66.62
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000121390 PSPC1 1-to-1
Human hg19 ENSG00000121390 PSPC1 1-to-1
Mouse mm10 ENSMUSG00000021938 Pspc1 1-to-1
Mouse mm9 ENSMUSG00000021938 Pspc1 1-to-1
Rat rn6 ENSRNOG00000020782 Pspc1 1-to-1
Cow bosTau6 ENSBTAG00000003934 PSPC1 1-to-1
Zebrafish danRer10 ENSDARG00000006621 pspc1 1-to-1
Fruitfly dm6 FBgn0004227 nonA 3-to-2
Fruitfly dm6 FBgn0015520 nonA-l 3-to-2