Special

ENSG00000138738 @ hg38

Biotype
protein_coding
Gene Symbol
PRDM5
Description
PR/SET domain 5 [Source:HGNC Symbol;Acc:HGNC:9349]
Coordinates
chr4:120684919-120922870:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
127
chr4:120756016-120756142
-
10.58
41.75
0
Exon Skipping
86
chr4:120754553-120754638
-
88.57
35.46
0
Exon Skipping
105
chr4:120710309-120710413
-
93.81
23.58
0
Exon Skipping
158
chr4:120798267-120798424
-
91.7
27.19
0
Exon Skipping
93
chr4:120816832-120816924
-
46.57
92.34
0
Exon Skipping
122
chr4:120816453-120816574
-
91.73
35.95
0
Exon Skipping
264
chr4:120812551-120812814
-
4.28
21.54
0
Intron Retention
1428
chr4:120816925-120818352
-
18.51
42.62
0
Intron Retention
257
chr4:120816575-120816831
-
38.37
85.54
0
Intron Retention
5003
chr4:120811450-120816452
-
19.65
44.13
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000029913 Prdm5 1-to-1
Mouse mm9 ENSMUSG00000029913 Prdm5 1-to-1
Rat rn6 ENSRNOG00000023679 Prdm5 1-to-1
Cow bosTau6 ENSBTAG00000012111 PRDM5 1-to-1
Chicken galGal4 ENSGALG00000011963 PRDM5 1-to-1
Chicken galGal3 ENSGALG00000011963 PRDM5 1-to-1
Zebrafish danRer10 ENSDARG00000006288 prdm5 1-to-1
Fruitfly dm6 FBgn0263072 CG43347 1-to-1