Special

ENSG00000138738 @ hg19

Biotype
protein_coding
Gene Symbol
PRDM5
Description
PR domain containing 5 [Source:HGNC Symbol;Acc:9349]
Coordinates
chr4:121606074-121844025:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
127
chr4:121677171-121677297
-
10.91
46.36
0
Exon Skipping
86
chr4:121675708-121675793
-
88.41
30.63
0
Exon Skipping
105
chr4:121631464-121631568
-
94.3
22.19
0
Exon Skipping
158
chr4:121719422-121719579
-
91.48
27.39
0
Exon Skipping
93
chr4:121737987-121738079
-
44.58
85.04
0
Exon Skipping
122
chr4:121737608-121737729
-
97.62
28.22
0
Intron Retention
1428
chr4:121738080-121739507
-
19.48
42.62
0
Intron Retention
257
chr4:121737730-121737986
-
40.11
66.62
0
Intron Retention
5003
chr4:121732605-121737607
-
24.07
42.67
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000029913 Prdm5 1-to-1
Mouse mm9 ENSMUSG00000029913 Prdm5 1-to-1
Rat rn6 ENSRNOG00000023679 Prdm5 1-to-1
Cow bosTau6 ENSBTAG00000012111 PRDM5 1-to-1
Chicken galGal4 ENSGALG00000011963 PRDM5 1-to-1
Chicken galGal3 ENSGALG00000011963 PRDM5 1-to-1
Zebrafish danRer10 ENSDARG00000006288 prdm5 1-to-1
Fruitfly dm6 FBgn0263072 CG43347 1-to-1