Special

ENSBTAG00000012111 @ bosTau6

Biotype
protein_coding
Gene Symbol
PRDM5
Description
PR domain containing 5 [Source:HGNC Symbol;Acc:HGNC:9349]
Coordinates
chr6:4491175-4743136:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
94.81
21.43
0
Alternative 3'ss
160
chr6:4640620-4640779
+
5.19
21.43
0
Alternative 5'ss
0
NA
+
32.64
20.38
0
Alternative 5'ss
39
chr6:4604172-4604210
+
67.36
20.38
0
Exon Skipping
93
chr6:4607612-4607704
+
18.81
73.99
0
Exon Skipping
86
chr6:4670307-4670392
+
82.19
69.48
0
Intron Retention
2112
chr6:4604211-4606322
+
17.47
30.63
0
Intron Retention
1114
chr6:4606498-4607611
+
9.01
35.62
0
Intron Retention
260
chr6:4607705-4607964
+
13.68
43.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000138738 PRDM5 1-to-1
Human hg19 ENSG00000138738 PRDM5 1-to-1
Mouse mm10 ENSMUSG00000029913 Prdm5 1-to-1
Mouse mm9 ENSMUSG00000029913 Prdm5 1-to-1
Rat rn6 ENSRNOG00000023679 Prdm5 1-to-1
Chicken galGal4 ENSGALG00000011963 PRDM5 1-to-1
Chicken galGal3 ENSGALG00000011963 PRDM5 1-to-1
Zebrafish danRer10 ENSDARG00000006288 prdm5 1-to-1
Fruitfly dm6 FBgn0263072 CG43347 1-to-1