Special

ENSG00000143776 @ hg38

Biotype
protein_coding
Gene Symbol
CDC42BPA
Description
CDC42 binding protein kinase alpha [Source:HGNC Symbol;Acc:HGNC:1737]
Coordinates
chr1:226989865-227318474:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
10.58
25.42
0
Alternative 5'ss
26
chr1:227010878-227010903
-
89.42
25.42
0
Exon Skipping
243
chr1:227112671-227112913
-
87.93
38.1
0
Exon Skipping
186
chr1:227010878-227011063
-
5.1
78.3
0
Exon Skipping
118
chr1:227004994-227005111
-
97.27
47.87
0
Exon Skipping
158
chr1:227219263-227219420
-
16.13
100
0
Exon Skipping
48
chr1:227068654-227068701
-
3.15
39.02
0
Exon Skipping
39
chr1:227059373-227059411
-
5.1
62.34
0
Exon Skipping
105
chr1:227051881-227051985
-
19.88
69.81
0
Exon Skipping
84
chr1:227047927-227048010
-
98.47
76.39
0
Exon Skipping
137
chr1:227141478-227141614
-
0.65
44.94
0
Intron Retention
21766
chr1:227048011-227069776
-
10.53
46.84
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026490 Cdc42bpa 1-to-1
Mouse mm9 ENSMUSG00000026490 Cdc42bpa 1-to-1
Rat rn6 ENSRNOG00000002841 Cdc42bpa 1-to-1
Cow bosTau6 ENSBTAG00000004778 CDC42BPA 1-to-2
Cow bosTau6 ENSBTAG00000022777 CDC42BPA 1-to-2
Chicken galGal4 ENSGALG00000009158 CDC42BPA 1-to-1
Chicken galGal3 ENSGALG00000009158 CDC42BPA 1-to-1
Zebrafish danRer10 ENSDARG00000088825 CDC42BPA 1-to-1
Fruitfly dm6 FBgn0023081 gek 4-to-1