Special

ENSG00000154263 @ hg19

Biotype
protein_coding
Gene Symbol
ABCA10
Description
ATP-binding cassette, sub-family A (ABC1), member 10 [Source:HGNC Symbol;Acc:30]
Coordinates
chr17:67143355-67240987:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
9.9
27.06
0
Alternative 5'ss
4
chr17:67146125-67146128
-
90.09
27.06
0
Exon Skipping
89
chr17:67175061-67175149
-
58.7
100
0
Exon Skipping
140
chr17:67187317-67187456
-
85.26
45.16
0
Exon Skipping
176
chr17:67189955-67190130
-
78.63
29.8
0
Exon Skipping
104
chr17:67217933-67218036
-
83.64
76.32
0
Exon Skipping
82
chr17:67219769-67219850
-
20.42
59.82
0
Exon Skipping
169
chr17:67197641-67197809
-
77.4
37.05
0
Exon Skipping
198
chr17:67192427-67192624
-
32.16
55.58
0
Intron Retention
13035
chr17:67197810-67210844
-
14.14
25.87
0
Intron Retention
4377
chr17:67193264-67197640
-
9.96
38.52
0
Intron Retention
201
chr17:67189754-67189954
-
12.13
60.47
0
Intron Retention
456
chr17:67188795-67189250
-
39.75
92.83
0
Intron Retention
1247
chr17:67187457-67188703
-
38.49
74.56
0
Intron Retention
698
chr17:67186619-67187316
-
29.51
87.77
0
Intron Retention
1295
chr17:67223427-67224721
-
9.75
60.5
0
Intron Retention
6639
chr17:67171655-67178293
-
29.34
73.43
0
Intron Retention
628
chr17:67170919-67171546
-
14.04
45.71
0
Intron Retention
9197
chr17:67161225-67170421
-
12.61
60.13
0
Intron Retention
809
chr17:67160296-67161104
-
23.59
67.4
0
Intron Retention
1615
chr17:67221671-67223285
-
25
76.74
0
Intron Retention
692
chr17:67150468-67151159
-
13.59
39.7
0
Intron Retention
284
chr17:67149688-67149971
-
35.73
73.16
0
Intron Retention
71
chr17:67149541-67149611
-
24.75
87.08
0
Intron Retention
895
chr17:67145230-67146124
-
11.05
31.61
0
Intron Retention
2627
chr17:67218839-67221465
-
12.27
26.91
0
Intron Retention
3186
chr17:67212500-67215685
-
28.7
100
0
Intron Retention
216
chr17:67212142-67212357
-
17.77
39.79
0
Intron Retention
963
chr17:67210993-67211955
-
29.69
68.45
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000044749 Abca6 2-to-1
Mouse mm9 ENSMUSG00000044749 Abca6 2-to-1
Cow bosTau6 ENSBTAG00000006937 ABCA10 1-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
Zebrafish danRer10 ENSDARG00000074041 abca5 5-to-1