Special

ENSG00000154263 @ hg38

Biotype
protein_coding
Gene Symbol
ABCA10
Description
ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30]
Coordinates
chr17:69147214-69244846:-
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
11.64
28.09
0
Alternative 5'ss
4
chr17:69149984-69149987
-
87.89
28.09
0
Alternative 5'ss
0
NA
-
36.74
37.09
0
Alternative 5'ss
80
chr17:69196206-69196285
-
61.39
40.99
0
Exon Skipping
89
chr17:69178920-69179008
-
60.64
100
0
Exon Skipping
140
chr17:69191176-69191315
-
85.74
40.89
0
Exon Skipping
176
chr17:69193814-69193989
-
84.19
33.01
0
Exon Skipping
104
chr17:69221792-69221895
-
84.79
76.32
0
Exon Skipping
80
chr17:69223628-69223707
-
16.96
56.59
0
Exon Skipping
169
chr17:69201500-69201668
-
76.01
36.62
0
Exon Skipping
278
chr17:69196206-69196483
-
48.22
83.33
0
Exon Skipping
38
chr17:69158010-69158047
-
55.29
58.86
0
Exon Skipping
59
chr17:69197064-69197122
-
93.54
22.31
0
Exon Skipping
91
chr17:69192563-69192653
-
97.26
17.94
0
Exon Skipping
167
chr17:69185477-69185643
-
96.93
59.26
0
Intron Retention
13035
chr17:69201669-69214703
-
31.9
24.66
0
Intron Retention
4377
chr17:69197123-69201499
-
9.62
24.99
0
Intron Retention
201
chr17:69193613-69193813
-
12.41
58.48
0
Intron Retention
456
chr17:69192654-69193109
-
39.9
92.9
0
Intron Retention
1247
chr17:69191316-69192562
-
40.03
81.38
0
Intron Retention
698
chr17:69190478-69191175
-
28.4
87.43
0
Intron Retention
2478
chr17:69187880-69190357
-
10.04
28.82
0
Intron Retention
2037
chr17:69185644-69187680
-
11.64
38.45
0
Intron Retention
2668
chr17:69182809-69185476
-
9.14
30.86
0
Intron Retention
6639
chr17:69175514-69182152
-
29.89
82.86
0
Intron Retention
628
chr17:69174778-69175405
-
16.59
68.73
0
Intron Retention
9197
chr17:69165084-69174280
-
13.15
61.17
0
Intron Retention
809
chr17:69164155-69164963
-
27.89
70.06
0
Intron Retention
1615
chr17:69225530-69227144
-
24.58
80.43
0
Intron Retention
692
chr17:69154327-69155018
-
15.76
32.17
0
Intron Retention
284
chr17:69153547-69153830
-
36.81
73.38
0
Intron Retention
71
chr17:69153400-69153470
-
22.01
87.08
0
Intron Retention
895
chr17:69149089-69149983
-
11.8
33.42
0
Intron Retention
2627
chr17:69222698-69225324
-
12.54
29.03
0
Intron Retention
2020
chr17:69219772-69221791
-
12.7
67.27
0
Intron Retention
3186
chr17:69216359-69219544
-
34.55
100
0
Intron Retention
216
chr17:69216001-69216216
-
18.92
45.39
0
Intron Retention
963
chr17:69214852-69215814
-
31.83
68.45
0
Intron Retention
212
chr17:69174395-69174606
-
8.88
54.23
0
Intron Retention
7150
chr17:69156924-69164073
-
23.01
73.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000044749 Abca6 2-to-1
Mouse mm9 ENSMUSG00000044749 Abca6 2-to-1
Cow bosTau6 ENSBTAG00000006937 ABCA10 1-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
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