Special

ENSG00000156304 @ hg38

Biotype
protein_coding
Gene Symbol
SCAF4
Description
SR-related CTD associated factor 4 [Source:HGNC Symbol;Acc:HGNC:19304]
Coordinates
chr21:31671033-31732075:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
32.19
100
0
Alternative 3'ss
66
chr21:31685175-31685240
-
67.81
100
0
Exon Skipping
177
chr21:31700995-31701171
-
98.29
27.85
0
Exon Skipping
84
chr21:31706274-31706357
-
99.24
57.26
0
Intron Retention
25305
chr21:31706358-31731662
-
5.33
28.81
0
Intron Retention
719
chr21:31693485-31694203
-
9.68
67.26
0
Intron Retention
844
chr21:31692450-31693293
-
11.32
56.98
0
Intron Retention
418
chr21:31691931-31692348
-
15.55
79.53
0
Intron Retention
863
chr21:31690954-31691816
-
7.22
54.02
0
Intron Retention
325
chr21:31701919-31702243
-
9.14
46.89
0
Intron Retention
604
chr21:31701172-31701775
-
6.31
59.38
0
Intron Retention
4244
chr21:31696751-31700994
-
12.22
64
0
Intron Retention
1132
chr21:31694981-31696112
-
6.13
53.87
0
Intron Retention
1385
chr21:31702380-31703764
-
5
50
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000022983 Scaf4 1-to-1
Mouse mm9 ENSMUSG00000022983 Scaf4 1-to-1
Rat rn6 ENSRNOG00000002104 Scaf4 1-to-1
Cow bosTau6 ENSBTAG00000018855 SCAF4 1-to-1
Chicken galGal4 ENSGALG00000015850 SCAF4 1-to-1
Chicken galGal3 ENSGALG00000015850 SFRS15 1-to-1
Zebrafish danRer10 ENSDARG00000077093 scaf4a 1-to-1
Fruitfly dm6 FBgn0034598 CG4266 2-to-1