Special

ENSG00000162804 @ hg19

Biotype
protein_coding
Gene Symbol
SNED1
Description
sushi, nidogen and EGF-like domains 1 [Source:HGNC Symbol;Acc:24696]
Coordinates
chr2:241938255-242034983:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
111
chr2:241983837-241983947
+
12.94
36.89
0
Exon Skipping
86
chr2:242013728-242013813
+
5.6
27.47
0
Exon Skipping
114
chr2:242002208-242002321
+
72.72
77.03
0
Exon Skipping
145
chr2:242010991-242011135
+
92.74
28.92
0
Exon Skipping
99
chr2:242012681-242012779
+
82.58
55.65
0
Exon Skipping
114
chr2:241979492-241979605
+
95.12
31.11
0
Intron Retention
1810
chr2:241989351-241991160
+
19.55
60.22
0
Intron Retention
197
chr2:241991575-241991771
+
14.01
100
0
Intron Retention
9464
chr2:241992744-242002207
+
39.83
86.97
0
Intron Retention
682
chr2:242002322-242003003
+
28.75
100
0
Intron Retention
311
chr2:242003118-242003428
+
14.37
34.93
0
Intron Retention
2167
chr2:242005012-242007178
+
8.98
46.02
0
Intron Retention
1374
chr2:242009617-242010990
+
8.63
37.85
0
Intron Retention
1387
chr2:242011294-242012680
+
17.65
69.89
0
Intron Retention
8312
chr2:242012780-242021091
+
26.69
98.31
0
Intron Retention
483
chr2:242021209-242021691
+
15.14
88.27
0
Intron Retention
889
chr2:242026891-242027779
+
53.01
95.92
0
Intron Retention
324
chr2:241976333-241976656
+
6.94
69.23
0
Intron Retention
2721
chr2:241976771-241979491
+
9.66
47.38
0
Intron Retention
7901
chr2:241979831-241987731
+
11.31
68.08
0
Intron Retention
221
chr2:241987858-241988078
+
16.21
68.89
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000047793 Sned1 1-to-1
Mouse mm9 ENSMUSG00000047793 Sned1 1-to-1
Rat rn6 ENSRNOG00000023548 Sned1 1-to-1
Cow bosTau6 ENSBTAG00000014132 SNED1 1-to-1
Chicken galGal4 ENSGALG00000006039 SNED1 1-to-1
Chicken galGal3 ENSGALG00000006039 SNED1 1-to-1
Zebrafish danRer10 ENSDARG00000044433 sned1 1-to-1