Special

ENSRNOG00000023548 @ rn6

Biotype
protein_coding
Gene Symbol
Sned1
Description
sushi, nidogen and EGF-like domains 1 [Source:RGD Symbol;Acc:1566079]
Coordinates
chr9:100380515-100437056:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
71.79
41.15
0
Alternative 3'ss
44
chr9:100421439-100421482
+
28.21
41.15
0
Alternative 5'ss
0
NA
+
32.65
47.74
0
Alternative 5'ss
28
chr9:100400966-100400993
+
67.35
47.74
0
Exon Skipping
114
chr9:100421066-100421179
+
94.89
29.51
0
Exon Skipping
114
chr9:100422133-100422246
+
98.59
28.57
0
Exon Skipping
100
chr9:100429390-100429489
+
6.58
15.49
0
Intron Retention
4750
chr9:100415585-100420334
+
8.62
28.61
0
Intron Retention
303
chr9:100421180-100421482
+
27.68
47.88
0
Intron Retention
74
chr9:100425820-100425893
+
12.78
29.12
0
Intron Retention
789
chr9:100425977-100426765
+
32.2
64
0
Intron Retention
2981
chr9:100426862-100429842
+
19.33
45.23
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000162804 SNED1 1-to-1
Human hg19 ENSG00000162804 SNED1 1-to-1
Mouse mm10 ENSMUSG00000047793 Sned1 1-to-1
Mouse mm9 ENSMUSG00000047793 Sned1 1-to-1
Cow bosTau6 ENSBTAG00000014132 SNED1 1-to-1
Zebrafish danRer10 ENSDARG00000044433 sned1 1-to-1