Special

ENSG00000163629 @ hg19

Biotype
protein_coding
Gene Symbol
PTPN13
Description
protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) [Source:HGNC Symbol;Acc:9646]
Coordinates
chr4:87515468-87736324:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
78.13
40.74
4
Alternative 5'ss
15
chr4:87685878-87685892
+
21.87
40.74
4
Exon Skipping
99
chr4:87691254-87691352
+
95.63
20.27
0
Exon Skipping
57
chr4:87674162-87674218
+
39.37
64.74
0
Exon Skipping
561
chr4:87622394-87622954
+
79.5
47.35
1
Intron Retention
1792
chr4:87689130-87690921
+
10.21
27.9
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000034573 Ptpn13 1-to-1
Mouse mm9 ENSMUSG00000034573 Ptpn13 1-to-1
Rat rn6 ENSRNOG00000002061 Ptpn13 1-to-1
Cow bosTau6 ENSBTAG00000014947 PTPN13 1-to-1
Chicken galGal4 ENSGALG00000011078 PTPN13 1-to-1
Chicken galGal3 ENSGALG00000011078 PTPN13 1-to-1
Zebrafish danRer10 ENSDARG00000103699 ptpn13 1-to-1