Special

ENSMUSG00000034573 @ mm10

Biotype
protein_coding
Gene Symbol
Ptpn13
Description
protein tyrosine phosphatase, non-receptor type 13 [Source:MGI Symbol;Acc:MGI:103293]
Coordinates
chr5:103425192-103598303:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
0.12
2.16
4
Alternative 5'ss
45
chr5:103556175-103556219
+
83.59
39.86
4
Alternative 5'ss
60
chr5:103556175-103556234
+
16.3
39.86
4
Exon Skipping
83
chr5:103496323-103496405
+
1.71
27.27
0
Exon Skipping
546
chr5:103501367-103501912
+
77.88
100
1
Exon Skipping
415
chr5:103540972-103541386
+
66.61
84.6
0
Exon Skipping
95
chr5:103541522-103541616
+
96.27
17.38
0
Exon Skipping
57
chr5:103543408-103543464
+
51.21
98.88
0
Exon Skipping
88
chr5:103492223-103492310
+
98.85
95.83
0
Intron Retention
2429
chr5:103489794-103492222
+
8.01
75
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000163629 PTPN13 1-to-1
Human hg19 ENSG00000163629 PTPN13 1-to-1
Rat rn6 ENSRNOG00000002061 Ptpn13 1-to-1
Cow bosTau6 ENSBTAG00000014947 PTPN13 1-to-1
Chicken galGal4 ENSGALG00000011078 PTPN13 1-to-1
Chicken galGal3 ENSGALG00000011078 PTPN13 1-to-1
Zebrafish danRer10 ENSDARG00000103699 ptpn13 1-to-1