Special

ENSGALG00000011078 @ galGal4

Biotype
protein_coding
Gene Symbol
PTPN13
Description
protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) [Source:HGNC Symbol;Acc:HGNC:9646]
Coordinates
chr4:45225572-45330749:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
65.96
58.04
4
Alternative 5'ss
15
chr4:45247336-45247350
-
34.04
58.04
4
Exon Skipping
204
chr4:45265477-45265680
-
2.76
75.24
0
Exon Skipping
256
chr4:45264926-45265181
-
0.92
36.45
0
Intron Retention
7969
chr4:45272214-45280182
-
5.6
38.6
0
Intron Retention
1782
chr4:45270336-45272117
-
38.43
100
0
Intron Retention
7335
chr4:45262892-45270226
-
5.08
64.38
0
Intron Retention
998
chr4:45259933-45260930
-
5.56
33.33
0
Intron Retention
88
chr4:45249301-45249388
-
5.23
42.81
0
Intron Retention
926
chr4:45247486-45248411
-
63.64
97.97
0
Intron Retention
1826
chr4:45245525-45247350
-
17.49
43.74
0
Intron Retention
1277
chr4:45239767-45241043
-
5.76
40.39
0
Intron Retention
729
chr4:45231509-45232237
-
6.05
33.37
0
Intron Retention
1075
chr4:45230330-45231404
-
6.64
38.11
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000163629 PTPN13 1-to-1
Human hg19 ENSG00000163629 PTPN13 1-to-1
Mouse mm10 ENSMUSG00000034573 Ptpn13 1-to-1
Mouse mm9 ENSMUSG00000034573 Ptpn13 1-to-1
Rat rn6 ENSRNOG00000002061 Ptpn13 1-to-1
Cow bosTau6 ENSBTAG00000014947 PTPN13 1-to-2
Cow bosTau6 ENSBTAG00000046971 1-to-2
Zebrafish danRer10 ENSDARG00000103699 ptpn13 1-to-1