Special

ENSBTAG00000014947 @ bosTau6

Biotype
protein_coding
Gene Symbol
PTPN13
Description
Bos taurus protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) (PTPN13), mRNA. [Source:RefSeq mRNA;Acc:NM_174590]
Coordinates
chr6:103374250-103511357:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
88.48
21.21
0
Alternative 3'ss
3
chr6:103396313-103396315
+
11.52
21.21
0
Alternative 5'ss
0
NA
+
84.63
27.9
4
Alternative 5'ss
15
chr6:103495087-103495101
+
15.37
27.9
4
Exon Skipping
418
chr6:103474723-103475140
+
60.03
44.81
0
Exon Skipping
57
chr6:103476968-103477024
+
53.41
60.24
0
Exon Skipping
567
chr6:103426599-103427165
+
73.87
37.03
1
Intron Retention
139
chr6:103475141-103475279
+
7.74
72.97
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000163629 PTPN13 1-to-1
Human hg19 ENSG00000163629 PTPN13 1-to-1
Mouse mm10 ENSMUSG00000034573 Ptpn13 1-to-1
Mouse mm9 ENSMUSG00000034573 Ptpn13 1-to-1
Chicken galGal4 ENSGALG00000011078 PTPN13 2-to-1
Chicken galGal3 ENSGALG00000011078 PTPN13 1-to-1
Zebrafish danRer10 ENSDARG00000103699 ptpn13 1-to-1