Special

ENSG00000164068 @ hg19

Biotype
protein_coding
Gene Symbol
RNF123
Description
ring finger protein 123 [Source:HGNC Symbol;Acc:21148]
Coordinates
chr3:49726932-49758962:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
91.42
30.99
0
Alternative 5'ss
216
chr3:49727040-49727255
+
8.58
30.99
0
Alternative 5'ss
9
chr3:49742607-49742615
+
93.02
23.08
0
Alternative 5'ss
13
chr3:49742607-49742619
+
6.64
23.08
0
Intron Retention
227
chr3:49742190-49742416
+
8.67
28.26
0
Intron Retention
856
chr3:49750090-49750945
+
14.96
47.46
0
Intron Retention
4033
chr3:49753911-49757943
+
27.22
42.62
0
Intron Retention
146
chr3:49758087-49758232
+
42.82
76.12
0
Intron Retention
125
chr3:49758328-49758452
+
32.7
72.51
0
Intron Retention
79
chr3:49758539-49758617
+
36.8
92.52
0
Intron Retention
140
chr3:49734656-49734795
+
2.7
74.75
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000041528 Rnf123 1-to-1
Mouse mm9 ENSMUSG00000041528 Rnf123 1-to-1
Rat rn6 ENSRNOG00000033378 Rnf123 1-to-1
Cow bosTau6 ENSBTAG00000011588 RNF123 1-to-1
Chicken galGal4 ENSGALG00000002486 RNF123 1-to-1
Chicken galGal3 ENSGALG00000002486 RNF123 1-to-1
Zebrafish danRer10 ENSDARG00000031269 rnf123 1-to-1
Fruitfly dm6 FBgn0038296 CG6752 1-to-1