Special

ENSG00000164068 @ hg38

Biotype
protein_coding
Gene Symbol
RNF123
Description
ring finger protein 123 [Source:HGNC Symbol;Acc:HGNC:21148]
Coordinates
chr3:49689499-49721529:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
89.34
100
0
Alternative 5'ss
216
chr3:49689607-49689822
+
10.66
100
0
Exon Skipping
88
chr3:49713738-49713825
+
97.11
58.46
0
Exon Skipping
126
chr3:49700227-49700352
+
97.25
25.53
0
Exon Skipping
463
chr3:49689360-49689822
+
38.75
50.81
0
Intron Retention
1523
chr3:49689607-49691129
+
11.86
44.23
0
Intron Retention
119
chr3:49700353-49700471
+
5.84
55.22
0
Intron Retention
172
chr3:49701911-49702082
+
4.03
52.57
0
Intron Retention
227
chr3:49704757-49704983
+
8.71
28.57
0
Intron Retention
856
chr3:49712657-49713512
+
14.59
47.46
0
Intron Retention
5633
chr3:49691510-49697142
+
6.65
65.85
0
Intron Retention
4033
chr3:49716478-49720510
+
22.15
45.86
0
Intron Retention
146
chr3:49720654-49720799
+
37.47
76.81
0
Intron Retention
125
chr3:49720895-49721019
+
28.78
73.22
0
Intron Retention
79
chr3:49721106-49721184
+
31.94
93.44
0
Intron Retention
140
chr3:49697223-49697362
+
4.22
74.75
0
Intron Retention
112
chr3:49697940-49698051
+
4.67
94.67
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000041528 Rnf123 1-to-1
Mouse mm9 ENSMUSG00000041528 Rnf123 1-to-1
Rat rn6 ENSRNOG00000033378 Rnf123 1-to-1
Cow bosTau6 ENSBTAG00000011588 RNF123 1-to-1
Chicken galGal4 ENSGALG00000002486 RNF123 1-to-1
Chicken galGal3 ENSGALG00000002486 RNF123 1-to-1
Zebrafish danRer10 ENSDARG00000031269 rnf123 1-to-1
Fruitfly dm6 FBgn0038296 CG6752 1-to-1