Special

ENSG00000169684 @ hg19

Biotype
protein_coding
Gene Symbol
CHRNA5
Description
cholinergic receptor, nicotinic, alpha 5 (neuronal) [Source:HGNC Symbol;Acc:1959]
Coordinates
chr15:78857862-78887611:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
11.51
13.77
0
Alternative 5'ss
255
chr15:78882192-78882446
+
88.49
13.77
0
Exon Skipping
152
chr15:78873153-78873304
+
94.27
40.74
0
Exon Skipping
410
chr15:78882569-78882978
+
29.15
73.35
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000035594 Chrna5 1-to-1
Mouse mm9 ENSMUSG00000035594 Chrna5 1-to-1
Rat rn6 ENSRNOG00000013610 Chrna5 1-to-1
Chicken galGal4 ENSGALG00000003021 CHRNA5 1-to-1
Chicken galGal3 ENSGALG00000003021 F1NIT6_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000003420 chrna5 1-to-1
Fruitfly dm6 FBgn0000036 nAChRalpha1 9-to-5
Fruitfly dm6 FBgn0000039 nAChRalpha2 9-to-5
Fruitfly dm6 FBgn0004118 nAChRbeta2 9-to-5
Fruitfly dm6 FBgn0015519 nAChRalpha3 9-to-5
Fruitfly dm6 FBgn0266347 nAChRalpha4 9-to-5