ENSG00000169684 @ hg38

Biotype

protein_coding

Gene Symbol

CHRNA5

Description

cholinergic receptor nicotinic alpha 5 subunit [Source:HGNC Symbol;Acc:HGNC:1959]

Coordinates

chr15:78565520-78595269:+

Assembly

hg38

Other assemblies

hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

The Cancer Genome Atlas (TCGA)
Genotype-Tissue Expression Project (GTEx)
Autistic and control brains
Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

HsaALTD0001435-2/3

Alternative 5'ss

249

chr15:78589850-78590098

+

43.07

89.29

0

HsaALTD0001435-3/3

Alternative 5'ss

255

chr15:78589850-78590104

+

50.54

89.29

0

HsaEX0015311

Exon Skipping

110

chr15:78588314-78588423

+

98.24

36.07

0

HsaEX0015312

Exon Skipping

152

chr15:78580811-78580962

+

95.84

25

0

HsaINT1007686

Intron Retention

2455

chr15:78590637-78593091

+

16.14

89.47

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Mouse	mm10	ENSMUSG00000035594	Chrna5	1-to-1
Mouse	mm9	ENSMUSG00000035594	Chrna5	1-to-1
Rat	rn6	ENSRNOG00000013610	Chrna5	1-to-1
Chicken	galGal4	ENSGALG00000003021	CHRNA5	1-to-1
Chicken	galGal3	ENSGALG00000003021	F1NIT6_CHICK	1-to-1
Zebrafish	danRer10	ENSDARG00000003420	chrna5	1-to-1
Fruitfly	dm6	FBgn0000036	nAChRalpha1	9-to-5
Fruitfly	dm6	FBgn0000039	nAChRalpha2	9-to-5
Fruitfly	dm6	FBgn0004118	nAChRbeta2	9-to-5
Fruitfly	dm6	FBgn0015519	nAChRalpha3	9-to-5
Fruitfly	dm6	FBgn0266347	nAChRalpha4	9-to-5