Special

ENSG00000188153 @ hg38

Biotype
protein_coding
Gene Symbol
COL4A5
Description
collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
Coordinates
chrX:108439844-108697545:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
52
chrX:108536002-108536053
+
1.36
28
0
Exon Skipping
9
chrX:108674745-108674753
+
52.59
100
0
Intron Retention
1133
chrX:108597569-108598701
+
19.79
85.71
0
Intron Retention
2522
chrX:108598871-108601392
+
16.81
63.02
0
Intron Retention
3680
chrX:108603062-108606741
+
6.1
58.24
0
Intron Retention
8018
chrX:108606893-108614910
+
9.48
75.3
0
Intron Retention
3045
chrX:108677634-108680678
+
9.85
44.72
0
Intron Retention
2591
chrX:108568822-108571412
+
18.75
73.41
0
Intron Retention
8995
chrX:108668505-108677499
+
22.41
84.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000031274 Col4a5 1-to-1
Mouse mm9 ENSMUSG00000031274 Col4a5 1-to-1
Rat rn6 ENSRNOG00000018951 Col4a5 1-to-1
Cow bosTau6 ENSBTAG00000014575 COL4A5 1-to-1
Chicken galGal4 ENSGALG00000008141 COL4A5 1-to-1
Chicken galGal3 ENSGALG00000008141 COL4A5 1-to-1
Zebrafish danRer10 ENSDARG00000052063 col4a5 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2