Special

ENSG00000189298 @ hg38

Biotype
protein_coding
Gene Symbol
ZKSCAN3
Description
zinc finger with KRAB and SCAN domains 3 [Source:HGNC Symbol;Acc:HGNC:13853]
Coordinates
chr6:28349914-28369177:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
237
chr6:28359665-28359901
+
24.22
51.77
0
Alternative 5'ss
324
chr6:28359665-28359988
+
65.52
54.89
0
Exon Skipping
178
chr6:28360504-28360681
+
5.84
24.65
0
Exon Skipping
117
chr6:28350272-28350388
+
4.99
19.65
0
Exon Skipping
464
chr6:28359525-28359988
+
88.97
38.3
0
Exon Skipping
124
chr6:28363692-28363815
+
82.6
60.32
0
Intron Retention
204
chr6:28350068-28350271
+
17.23
67.27
0
Intron Retention
1610
chr6:28363816-28365425
+
12.08
34.23
0
Intron Retention
9136
chr6:28350389-28359524
+
10.04
43.66
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021327 Zkscan3 2-to-2
Mouse mm10 ENSMUSG00000054931 Zkscan4 2-to-2
Mouse mm9 ENSMUSG00000021327 Zkscan3 2-to-2
Mouse mm9 ENSMUSG00000054931 Zkscan4 2-to-2
Rat rn6 ENSRNOG00000051823 Zkscan4 2-to-2
Rat rn6 ENSRNOG00000055000 Zkscan3 2-to-2
Cow bosTau6 ENSBTAG00000003575 ZKSCAN4 2-to-1
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