Special

ENSG00000197283 @ hg19

Biotype
protein_coding
Gene Symbol
SYNGAP1
Description
synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:11497]
Coordinates
chr6:33387847-33421466:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
31.97
63.63
0
Alternative 3'ss
6
chr6:33414352-33414357
+
68.03
63.63
0
Alternative 3'ss
0
NA
+
73.14
43.49
4
Alternative 3'ss
13
chr6:33415607-33415619
+
26.86
43.49
4
Alternative 3'ss
0
NA
+
9.49
44.51
0
Exon Skipping
22
chr6:33419349-33419370
+
5.53
37.21
0
Exon Skipping
42
chr6:33410230-33410271
+
13.61
95.06
0
Exon Skipping
80
chr6:33416566-33416645
+
62.63
87.76
1



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000067629 Syngap1 1-to-1
Mouse mm9 ENSMUSG00000067629 Syngap1 1-to-1
Rat rn6 ENSRNOG00000000483 Syngap1 1-to-1
Cow bosTau6 ENSBTAG00000020975 SYNGAP1 1-to-1
Zebrafish danRer10 ENSDARG00000063713 SYNGAP1 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000069765 SYNGAP1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261570 CG42684 4-to-1