Special

ENSMUSG00000067629 @ mm9

Biotype
protein_coding
Gene Symbol
Syngap1
Description
synaptic Ras GTPase activating protein 1 homolog (rat) [Source:MGI Symbol;Acc:MGI:3039785]
Coordinates
chr17:27094363-27107590:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
68.41
52.07
4
Alternative 3'ss
13
chr17:27103815-27103827
+
31.59
52.07
4
Alternative 3'ss
0
NA
+
42.23
100
0
Alternative 3'ss
207
chr17:27096347-27096553
+
56.09
100
0
Exon Skipping
80
chr17:27104626-27104705
+
61.94
96.6
1
Exon Skipping
42
chr17:27098014-27098055
+
24.11
92.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197283 SYNGAP1 1-to-1
Human hg19 ENSG00000197283 SYNGAP1 1-to-1
Rat rn6 ENSRNOG00000000483 Syngap1 1-to-1
Cow bosTau6 ENSBTAG00000020975 SYNGAP1 1-to-1
Zebrafish danRer10 ENSDARG00000063713 SYNGAP1 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000069765 SYNGAP1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261570 CG42684 4-to-1