Special

ENSG00000204314 @ hg38

Biotype
protein_coding
Gene Symbol
PRRT1
Description
proline rich transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:13943]
Coordinates
chr6:32148359-32154373:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
11.28
81.25
0
Alternative 3'ss
323
chr6:32150584-32150906
-
88.72
81.25
0
Alternative 5'ss
0
NA
-
19.96
40.39
0
Alternative 5'ss
29
chr6:32153737-32153765
-
80.04
40.39
0
Alternative 5'ss
51
chr6:32154238-32154288
-
79.05
27.35
0
Alternative 5'ss
120
chr6:32154169-32154288
-
15.74
28.31
0
Exon Skipping
186
chr6:32149537-32149722
-
97.26
51.72
0
Exon Skipping
81
chr6:32152095-32152175
-
93.85
15.11
0
Exon Skipping
539
chr6:32150368-32150906
-
96.46
23.08
0
Intron Retention
796
chr6:32152176-32152971
-
41
82.53
0
Intron Retention
195
chr6:32151900-32152094
-
30.65
85.96
0
Intron Retention
645
chr6:32149723-32150367
-
7.66
31.25
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000015476 Prrt1 1-to-1
Mouse mm9 ENSMUSG00000015476 Prrt1 1-to-1
Rat rn6 ENSRNOG00000000433 Prrt1 1-to-1
Cow bosTau6 ENSBTAG00000038904 PRRT1 1-to-1
Zebrafish danRer10 ENSDARG00000062208 prrt1 1-to-1