Special

ENSMUSG00000025409 @ mm10

Biotype
protein_coding
Gene Symbol
Mbd6
Description
methyl-CpG binding domain protein 6 [Source:MGI Symbol;Acc:MGI:106378]
Coordinates
chr10:127281956-127289018:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
51.39
49.9
0
Alternative 3'ss
3
chr10:127284213-127284215
-
48.61
49.9
0
Alternative 3'ss
336
chr10:127283604-127283939
-
59.03
30.45
0
Alternative 3'ss
339
chr10:127283604-127283942
-
40.9
30.45
0
Alternative 3'ss
0
NA
-
82.5
44.7
0
Alternative 3'ss
74
chr10:127283089-127283162
-
17.42
44.7
0
Alternative 3'ss
0
NA
-
40.17
73.98
0
Alternative 3'ss
4
chr10:127282904-127282907
-
59.83
73.98
0
Alternative 5'ss
4
chr10:127283025-127283028
-
59.84
73.98
0
Alternative 5'ss
8
chr10:127283021-127283028
-
40.15
73.98
0
Alternative 5'ss
0
NA
-
6.46
23.5
0
Alternative 5'ss
4
chr10:127282737-127282740
-
91.95
25.68
0
Alternative 5'ss
0
NA
-
86.32
90.93
0
Alternative 5'ss
354
chr10:127288355-127288708
-
7.94
37.55
0
Alternative 5'ss
359
chr10:127288350-127288708
-
5.74
88.73
0
Intron Retention
88
chr10:127287539-127287626
-
19.05
47.37
0
Intron Retention
212
chr10:127284486-127284697
-
11.58
45.65
0
Intron Retention
119
chr10:127284216-127284334
-
13.83
40.49
0
Intron Retention
100
chr10:127283943-127284042
-
11.42
38.9
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000166987 MBD6 1-to-1
Human hg19 ENSG00000166987 MBD6 1-to-1
Rat rn6 ENSRNOG00000006209 Mbd6 1-to-1
Cow bosTau6 ENSBTAG00000010616 MBD6 1-to-1
Chicken galGal3 ENSGALG00000012449 MBD5 2-to-1
Fruitfly dm6 FBgn0016754 sba 2-to-1