Special

ENSMUSG00000026924 @ mm10

Biotype
protein_coding
Gene Symbol
Sec16a
Description
SEC16 homolog A, endoplasmic reticulum export factor [Source:MGI Symbol;Acc:MGI:2139207]
Coordinates
chr2:26409431-26445216:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
353
chr2:26438466-26438818
-
85.37
33.19
0
Alternative 3'ss
356
chr2:26438466-26438821
-
14.31
33.19
0
Exon Skipping
83
chr2:26411087-26411169
-
3.41
47.53
0
Exon Skipping
60
chr2:26413679-26413738
-
32.14
100
1
Exon Skipping
78
chr2:26412836-26412913
-
96.12
76.93
0
Exon Skipping
75
chr2:26414371-26414445
-
100
0.33
1
Intron Retention
345
chr2:26415772-26416116
-
6.67
58.01
0
Intron Retention
232
chr2:26415402-26415633
-
3.17
74.92
0
Intron Retention
108
chr2:26428954-26429061
-
2.14
100
0
Intron Retention
765
chr2:26412914-26413678
-
10.11
48.86
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000148396 SEC16A 1-to-1
Human hg19 ENSG00000148396 SEC16A 1-to-1
Rat rn6 ENSRNOG00000019122 Sec16a 1-to-1
Cow bosTau6 ENSBTAG00000023933 SEC16A 1-to-1
Chicken galGal4 ENSGALG00000002364 SEC16A 1-to-1
Chicken galGal3 ENSGALG00000002364 SEC16A 1-to-1
Fruitfly dm6 FBgn0052654 Sec16 2-to-1