Special

ENSRNOG00000019122 @ rn6

Biotype
protein_coding
Gene Symbol
Sec16a
Description
SEC16 homolog A, endoplasmic reticulum export factor [Source:RGD Symbol;Acc:2322350]
Coordinates
chr3:3856218-3890758:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
128
chr3:3876476-3876603
-
15.23
60
0
Alternative 3'ss
130
chr3:3876476-3876605
-
84.44
60
0
Alternative 5'ss
0
NA
-
74.23
7.89
0
Alternative 5'ss
4
chr3:3891153-3891156
-
25.77
7.89
0
Alternative 5'ss
0
NA
-
84.79
60
0
Alternative 5'ss
2
chr3:3876744-3876745
-
15.21
60
0
Alternative 5'ss
0
NA
-
20.53
46.9
0
Alternative 5'ss
197
chr3:3890436-3890632
-
79.3
46.9
0
Exon Skipping
78
chr3:3861540-3861617
-
99.91
2.81
1
Exon Skipping
60
chr3:3860765-3860824
-
34.59
94.74
1
Exon Skipping
71
chr3:3889197-3889267
-
2.19
13.51
0
Intron Retention
177
chr3:3872302-3872478
-
10.26
41.4
0
Intron Retention
197
chr3:3871993-3872189
-
24.42
77.75
0
Intron Retention
1445
chr3:3866646-3868090
-
16.15
41.63
0
Intron Retention
1577
chr3:3859963-3861539
-
15.01
82.01
0
Intron Retention
527
chr3:3876945-3877471
-
9.29
46.43
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000148396 SEC16A 1-to-1
Human hg19 ENSG00000148396 SEC16A 1-to-1
Mouse mm10 ENSMUSG00000026924 Sec16a 1-to-1
Mouse mm9 ENSMUSG00000026924 Sec16a 1-to-1
Cow bosTau6 ENSBTAG00000023933 SEC16A 1-to-1
Fruitfly dm6 FBgn0052654 Sec16 2-to-1