FBgn0052654 @ dm6
Biotype
protein_coding
Gene Symbol
Sec16
Description
The gene Secretory 16 is referred to in FlyBase by the symbol DmelSec16 (CG32654, FBgn0052654). It is a protein_coding_gene from Dmel. It has 7 annotated transcripts and 7 polypeptides (6 unique). Gene sequence location is X:12596047..12609910. Its molecular function is described by: Ras GTPase binding. It is involved in the biological process described with 10 unique terms, many of which group under: endomembrane system organization; response to starvation; endoplasmic reticulum organization; stress granule assembly; response to nutrient levels. 8 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chrX:12596047-12609910:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000120341 | SEC16B | 1-to-2 |
| Human | hg38 | ENSG00000148396 | SEC16A | 1-to-2 |
| Human | hg19 | ENSG00000120341 | SEC16B | 1-to-2 |
| Human | hg19 | ENSG00000148396 | SEC16A | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000026589 | Sec16b | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000026924 | Sec16a | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000026589 | Sec16b | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000026924 | Sec16a | 1-to-2 |
| Rat | rn6 | ENSRNOG00000005229 | Sec16b | 1-to-2 |
| Rat | rn6 | ENSRNOG00000019122 | Sec16a | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000000854 | SEC16B | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000023933 | SEC16A | 1-to-2 |
| Chicken | galGal4 | ENSGALG00000002364 | SEC16A | 1-to-3 |
| Chicken | galGal4 | ENSGALG00000004424 | SEC16B | 1-to-3 |
| Chicken | galGal3 | ENSGALG00000002364 | SEC16A | 1-to-3 |
| Chicken | galGal3 | ENSGALG00000004424 | SEC16B | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000099554 | sec16b | 1-to-1 |