Special

ENSGALG00000004424 @ galGal4

Biotype
protein_coding
Gene Symbol
SEC16B
Description
protein transport protein Sec16B [Source:RefSeq peptide;Acc:NP_001026440]
Coordinates
chr8:6597575-6608922:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
52.3
38.46
0
Alternative 3'ss
3
chr8:6607804-6607806
+
46.51
37.32
0
Alternative 3'ss
0
NA
+
13.36
33.33
0
Alternative 3'ss
76
chr8:6601449-6601524
+
67.5
30.77
0
Alternative 3'ss
108
chr8:6601417-6601524
+
14.99
24.86
0
Exon Skipping
114
chr8:6606212-6606325
+
95.72
12.9
0
Exon Skipping
107
chr8:6598519-6598625
+
89.05
34.64
0
Exon Skipping
136
chr8:6601449-6601584
+
94.32
23.53
0
Intron Retention
358
chr8:6597735-6598092
+
28.81
27.03
0
Intron Retention
309
chr8:6598626-6598934
+
13.9
43.69
0
Intron Retention
141
chr8:6599244-6599384
+
7.33
36.38
0
Intron Retention
1081
chr8:6600368-6601448
+
25.85
55.97
0
Intron Retention
1470
chr8:6604742-6606211
+
9.72
61.44
0
Intron Retention
664
chr8:6606564-6607227
+
14.06
59.11
0
Intron Retention
98
chr8:6608613-6608710
+
13.4
19.6
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000120341 SEC16B 1-to-1
Human hg19 ENSG00000120341 SEC16B 1-to-1
Mouse mm10 ENSMUSG00000026589 Sec16b 1-to-1
Mouse mm9 ENSMUSG00000026589 Sec16b 1-to-1
Rat rn6 ENSRNOG00000005229 Sec16b 1-to-1
Cow bosTau6 ENSBTAG00000000854 SEC16B 1-to-1
Zebrafish danRer10 ENSDARG00000099554 sec16b 1-to-1
Fruitfly dm6 FBgn0052654 Sec16 3-to-1