Special

ENSMUSG00000038860 @ mm10

Biotype
protein_coding
Gene Symbol
Garnl3
Description
GTPase activating RANGAP domain-like 3 [Source:MGI Symbol;Acc:MGI:2139309]
Coordinates
chr2:32986224-33131654:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
84.85
39.09
0
Alternative 5'ss
4
chr2:33104849-33104852
-
15.15
39.09
0
Exon Skipping
90
chr2:33028249-33028338
-
2.78
29.82
0
Exon Skipping
70
chr2:33085875-33085944
-
86.51
60
1
Exon Skipping
114
chr2:33130114-33130227
-
5.5
20.62
0
Exon Skipping
27
chr2:33041443-33041469
-
96.97
100
0
Intron Retention
1137
chr2:33085945-33087081
-
19.24
26.31
0
Intron Retention
2545
chr2:33023535-33026079
-
13.43
42.42
0
Intron Retention
720
chr2:33022769-33023488
-
11.11
33.33
0
Intron Retention
580
chr2:33034130-33034709
-
5.98
25.58
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136895 GARNL3 1-to-1
Human hg19 ENSG00000136895 GARNL3 1-to-1
Rat rn6 ENSRNOG00000057044 Garnl3 1-to-1
Cow bosTau6 ENSBTAG00000006948 GARNL3 1-to-1
Chicken galGal4 ENSGALG00000000847 GARNL3 1-to-1
Chicken galGal3 ENSGALG00000000847 GARNL3 1-to-1
Zebrafish danRer10 ENSDARG00000060631 garnl3 1-to-1