Special

ENSMUSG00000038860 @ mm9

Biotype
protein_coding
Gene Symbol
Garnl3
Description
GTPase activating RANGAP domain-like 3 [Source:MGI Symbol;Acc:MGI:2139309]
Coordinates
chr2:32841886-32987174:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
84.28
37.21
0
Alternative 5'ss
4
chr2:32960369-32960372
-
15.72
37.21
0
Exon Skipping
90
chr2:32883769-32883858
-
2.59
29.82
0
Exon Skipping
70
chr2:32941395-32941464
-
86.52
55.1
1
Intron Retention
1137
chr2:32941465-32942601
-
22.49
23.86
0
Intron Retention
2545
chr2:32879055-32881599
-
14.27
42.42
0
Intron Retention
720
chr2:32878289-32879008
-
12.48
31.8
0
Intron Retention
580
chr2:32889650-32890229
-
6.15
25.58
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136895 GARNL3 1-to-1
Human hg19 ENSG00000136895 GARNL3 1-to-1
Rat rn6 ENSRNOG00000057044 Garnl3 1-to-1
Cow bosTau6 ENSBTAG00000006948 GARNL3 1-to-1
Chicken galGal4 ENSGALG00000000847 GARNL3 1-to-1
Chicken galGal3 ENSGALG00000000847 GARNL3 1-to-1
Zebrafish danRer10 ENSDARG00000060631 garnl3 1-to-1