Special

ENSGALG00000000847 @ galGal4

Biotype
protein_coding
Gene Symbol
GARNL3
Description
GTPase-activating Rap/Ran-GAP domain-like protein 3 [Source:RefSeq peptide;Acc:NP_001025847]
Coordinates
chr17:10406697-10443313:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
47
chr17:10423929-10423975
+
8.79
46.58
0
Alternative 3'ss
51
chr17:10423925-10423975
+
82.57
55.82
0
Alternative 3'ss
40
chr17:10441742-10441781
+
72.61
39.98
0
Alternative 3'ss
46
chr17:10441736-10441781
+
27.18
39.98
0
Alternative 5'ss
0
NA
+
8.95
35.66
0
Alternative 5'ss
4
chr17:10422973-10422976
+
91.05
35.66
0
Exon Skipping
27
chr17:10421177-10421203
+
87.56
41.47
0
Exon Skipping
99
chr17:10422277-10422375
+
90.98
33.24
0
Exon Skipping
176
chr17:10431386-10431561
+
4.09
40.87
0
Exon Skipping
112
chr17:10442286-10442397
+
94.43
14.77
0
Exon Skipping
70
chr17:10414670-10414739
+
100
0.39
1
Intron Retention
7313
chr17:10407357-10414669
+
7.83
62.77
0
Intron Retention
1455
chr17:10414740-10416194
+
15.07
62.87
0
Intron Retention
1353
chr17:10416270-10417622
+
8.21
37.37
0
Intron Retention
391
chr17:10417723-10418113
+
17.79
51.18
0
Intron Retention
704
chr17:10418233-10418936
+
6.01
29.82
0
Intron Retention
394
chr17:10421204-10421597
+
8.02
46.13
0
Intron Retention
2173
chr17:10426290-10428462
+
9.22
56.7
0
Intron Retention
965
chr17:10430970-10431934
+
7.74
41.96
0
Intron Retention
730
chr17:10432047-10432776
+
7.94
45.72
0
Intron Retention
2009
chr17:10437164-10439172
+
10.77
49.21
0
Intron Retention
1108
chr17:10440634-10441741
+
10.45
39.3
0
Intron Retention
334
chr17:10441952-10442285
+
48.85
79.88
0
Intron Retention
759
chr17:10442398-10443156
+
42.37
69.35
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136895 GARNL3 1-to-1
Human hg19 ENSG00000136895 GARNL3 1-to-1
Mouse mm10 ENSMUSG00000038860 Garnl3 1-to-1
Mouse mm9 ENSMUSG00000038860 Garnl3 1-to-1
Rat rn6 ENSRNOG00000057044 Garnl3 1-to-1
Cow bosTau6 ENSBTAG00000006948 GARNL3 1-to-1
Zebrafish danRer10 ENSDARG00000060631 garnl3 1-to-1