Special

ENSMUSG00000054582 @ mm9

Biotype
protein_coding
Gene Symbol
Pabpc1l
Description
poly(A) binding protein, cytoplasmic 1-like [Source:MGI Symbol;Acc:MGI:1922908]
Coordinates
chr2:163851186-163876274:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
117
chr2:163870000-163870116
+
68.15
88.89
0
Exon Skipping
136
chr2:163873747-163873882
+
13.07
50.94
0
Exon Skipping
131
chr2:163875230-163875360
+
18.04
46.51
0
Exon Skipping
94
chr2:163873217-163873310
+
96.58
14.04
0
Intron Retention
1482
chr2:163870117-163871598
+
14.12
41.48
0
Intron Retention
1511
chr2:163871706-163873216
+
14.85
44.09
0
Intron Retention
1919
chr2:163873311-163875229
+
17.33
66.67
0
Intron Retention
3530
chr2:163853405-163856934
+
7.25
21.74
0
Intron Retention
2662
chr2:163858319-163860980
+
6.51
27.27
0
Intron Retention
984
chr2:163868302-163869285
+
41.61
42.81
0
Intron Retention
623
chr2:163869377-163869999
+
24.46
65.31
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000101104 PABPC1L 1-to-1
Human hg19 ENSG00000101104 PABPC1L 1-to-1
Rat rn6 ENSRNOG00000012750 Pabpc1l 1-to-1
Cow bosTau6 ENSBTAG00000016849 PABPC1L 1-to-1
Chicken galGal4 ENSGALG00000004123 1-to-1
Chicken galGal3 ENSGALG00000004123 PABPC1L 1-to-1
Zebrafish danRer10 ENSDARG00000002597 pabpc1l 1-to-1
Fruitfly dm6 FBgn0265297 pAbp 8-to-1