Special

ENSMUSG00000054582 @ mm10

Biotype
protein_coding
Gene Symbol
Pabpc1l
Description
poly(A) binding protein, cytoplasmic 1-like [Source:MGI Symbol;Acc:MGI:1922908]
Coordinates
chr2:164025450-164050538:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
94.31
23.49
0
Alternative 3'ss
76
chr2:164043474-164043549
+
5.69
23.49
0
Exon Skipping
117
chr2:164044264-164044380
+
71.66
88.89
0
Exon Skipping
136
chr2:164048011-164048146
+
10.53
45.54
0
Exon Skipping
131
chr2:164049494-164049624
+
16.45
100
0
Exon Skipping
34
chr2:164047384-164047417
+
7.52
32.71
0
Exon Skipping
94
chr2:164047481-164047574
+
83.07
74.61
0
Intron Retention
1482
chr2:164044381-164045862
+
11.63
41.48
0
Intron Retention
1511
chr2:164045970-164047480
+
14.99
45.71
0
Intron Retention
1919
chr2:164047575-164049493
+
16.03
66.67
0
Intron Retention
3530
chr2:164027669-164031198
+
4.35
21.74
0
Intron Retention
2662
chr2:164032583-164035244
+
4.65
27.27
0
Intron Retention
984
chr2:164042566-164043549
+
32.58
80.3
0
Intron Retention
623
chr2:164043641-164044263
+
18.81
67.02
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000101104 PABPC1L 1-to-1
Human hg19 ENSG00000101104 PABPC1L 1-to-1
Rat rn6 ENSRNOG00000012750 Pabpc1l 1-to-1
Cow bosTau6 ENSBTAG00000016849 PABPC1L 1-to-1
Chicken galGal4 ENSGALG00000004123 1-to-1
Chicken galGal3 ENSGALG00000004123 PABPC1L 1-to-1
Zebrafish danRer10 ENSDARG00000002597 pabpc1l 1-to-1
Fruitfly dm6 FBgn0265297 pAbp 8-to-1