Special

ENSMUSG00000056116 @ mm10

Biotype
protein_coding
Gene Symbol
H2-T22
Description
histocompatibility 2, T region locus 22 [Source:MGI Symbol;Acc:MGI:95956]
Coordinates
chr17:36037128-36042747:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
96
chr17:36042017-36042112
-
2.98
68.25
0
Alternative 3'ss
112
chr17:36042017-36042128
-
93.35
70.49
0
Exon Skipping
21
chr17:36038985-36039005
-
88.37
53.84
0
Exon Skipping
105
chr17:36040225-36040329
-
81.83
84.9
0
Exon Skipping
119
chr17:36042342-36042460
-
97.88
100
0
Intron Retention
213
chr17:36042129-36042341
-
6.34
62.99
0
Intron Retention
122
chr17:36039055-36039176
-
13.13
44.83
0
Intron Retention
208
chr17:36038777-36038984
-
15.36
52.43
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000204525 HLA-C 30-to-6
Human hg38 ENSG00000204592 HLA-E 30-to-6
Human hg38 ENSG00000204642 HLA-F 30-to-6
Human hg38 ENSG00000206503 HLA-A 30-to-6
Human hg38 ENSG00000234745 HLA-B 30-to-6
Human hg19 ENSG00000204525 HLA-C 30-to-6
Human hg19 ENSG00000204592 HLA-E 30-to-6
Human hg19 ENSG00000204642 HLA-F 30-to-6
Human hg19 ENSG00000206503 HLA-A 30-to-6
Human hg19 ENSG00000234745 HLA-B 30-to-6
Rat rn6 ENSRNOG00000000795 RT1-N3 2-to-2
Rat rn6 ENSRNOG00000029386 RT1-N2 2-to-2
Cow bosTau6 ENSBTAG00000007075 30-to-10
Cow bosTau6 ENSBTAG00000008959 30-to-10
Cow bosTau6 ENSBTAG00000012208 30-to-10
Cow bosTau6 ENSBTAG00000019386 BOLA-NC 30-to-10
Cow bosTau6 ENSBTAG00000022590 BOLA 30-to-10
Chicken galGal4 ENSGALG00000000178 BF1 35-to-17
Chicken galGal4 ENSGALG00000024348 35-to-17
Chicken galGal4 ENSGALG00000024372 BFIV21 35-to-17
Chicken galGal4 ENSGALG00000027293 35-to-17
Chicken galGal4 ENSGALG00000027944 35-to-17
Chicken galGal3 ENSGALG00000004617 34-to-24
Chicken galGal3 ENSGALG00000000178 F1NS77_CHICK 35-to-17
Chicken galGal3 ENSGALG00000024348 F1NFX9_CHICK 35-to-17
Chicken galGal3 ENSGALG00000024372 F1NM79_CHICK 35-to-17