Special

ENSRNOG00000009448 @ rn6

Biotype
protein_coding
Gene Symbol
Papln
Description
papilin, proteoglycan-like sulfated glycoprotein [Source:RGD Symbol;Acc:1311176]
Coordinates
chr6:107245820-107276755:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
6.19
25.18
0
Alternative 3'ss
4
chr6:107248455-107248458
+
93.81
25.18
0
Alternative 3'ss
0
NA
+
19.67
24.24
0
Alternative 3'ss
3
chr6:107276380-107276382
+
80.33
24.24
0
Alternative 5'ss
0
NA
+
5.48
23.81
0
Alternative 5'ss
4
chr6:107246369-107246372
+
94.52
23.81
0
Exon Skipping
236
chr6:107246815-107247050
+
17.14
36.54
0
Exon Skipping
66
chr6:107259809-107259874
+
5.57
26.09
0
Intron Retention
2082
chr6:107246373-107248454
+
8.7
25.93
0
Intron Retention
894
chr6:107259449-107260342
+
19.72
46.15
0
Intron Retention
1165
chr6:107265389-107266553
+
8.91
24.77
0
Intron Retention
114
chr6:107270788-107270901
+
8.38
94.44
0
Intron Retention
2325
chr6:107271011-107273335
+
10.92
100
0
Intron Retention
2877
chr6:107273503-107276379
+
23.03
25.32
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000100767 PAPLN 1-to-1
Human hg19 ENSG00000100767 PAPLN 1-to-1
Mouse mm10 ENSMUSG00000021223 Papln 1-to-1
Mouse mm9 ENSMUSG00000021223 Papln 1-to-1
Cow bosTau6 ENSBTAG00000011680 PAPLN 1-to-1
Chicken galGal4 ENSGALG00000009315 PAPLN 1-to-1
Chicken galGal3 ENSGALG00000009315 PAPLN 1-to-1
Zebrafish danRer10 ENSDARG00000027867 paplna 1-to-2
Zebrafish danRer10 ENSDARG00000042186 paplnb 1-to-2
Fruitfly dm6 FBgn0003137 Ppn 1-to-1