Special

FBgn0033368 @ dm6

Biotype
protein_coding
Gene Symbol
CG13743
Description
This gene is referred to in FlyBase by the symbol DmelCG13743 (FBgn0033368). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (3 unique). Gene sequence location is 2R:9044850..9060608. Its molecular function is described by: amino acid transmembrane transporter activity. It is involved in the biological process described with: amino acid transmembrane transport. 8 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: lethal - all die before end of pupal stage; some die during pupal stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, during late pupal stages, in adult male stages.
Coordinates
chr2R:9044850-9060608:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
91.19
36.97
0
Alternative 5'ss
247
chr2R:9059606-9059852
-
7.1
30.25
0
Exon Skipping
71
chr2R:9048467-9048537
-
80.87
100
0
Exon Skipping
162
chr2R:9048176-9048337
-
83.64
100
0
Exon Skipping
170
chr2R:9058974-9059143
-
8.86
60.89
0
Exon Skipping
60
chr2R:9056573-9056632
-
56.19
100
0
Exon Skipping
309
chr2R:9050843-9051151
-
95.01
59.9
0
Exon Skipping
115
chr2R:9050515-9050629
-
95.69
60.55
0
Intron Retention
304
chr2R:9059549-9059852
-
27.6
73.33
0
Intron Retention
909
chr2R:9046749-9047657
-
8.48
27.79
0
Intron Retention
2622
chr2R:9056633-9059254
-
14.87
65.73
0
Intron Retention
5421
chr2R:9051152-9056572
-
21.57
76.09
0
Intron Retention
213
chr2R:9050630-9050842
-
17.65
43.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000169507 SLC38A11 1-to-1
Human hg19 ENSG00000169507 SLC38A11 1-to-1
Mouse mm10 ENSMUSG00000061171 Slc38a11 1-to-1
Mouse mm9 ENSMUSG00000061171 Slc38a11 1-to-1
Rat rn6 ENSRNOG00000004966 Slc38a11 1-to-1
Cow bosTau6 ENSBTAG00000007650 SLC38A11 1-to-1
Chicken galGal4 ENSGALG00000011052 SLC38A11 1-to-1
Chicken galGal3 ENSGALG00000011052 SLC38A11 1-to-1
Zebrafish danRer10 ENSDARG00000040257 slc38a11 1-to-2
Zebrafish danRer10 ENSDARG00000103088 SLC38A11 (2 of 2) 1-to-2