BtaINT0103610 @ bosTau6
Intron Retention
Gene
ENSBTAG00000001864 | NR4A3
Description
nuclear receptor subfamily 4, group A, member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
Coordinates
chr8:65359607-65373695:+
Coord C1 exon
chr8:65359607-65359785
Coord A exon
chr8:65359786-65373130
Coord C2 exon
chr8:65373131-65373695
Length
13345 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGC
5' ss Score
9.88
3' ss Seq
CCTTTTCTATCCCTCTGCAGAAC
3' ss Score
12.24
Exon sequences
Seq C1 exon
GTCAAACACTGCTGAAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCATCGACTTCAGTGCCTTCGTGGATTTGGGGAGTGGCTCGACTCCATTAAAGACTTTTCCTTAAGTTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGCATGGTCACAG
Seq A exon
GTAAGCGCCACCCTGACATGACGTGAAAGGACTGTGTCTCCCCCTCTCTCTCTTCCTGGCTTATGTTTGATTCTGGCTTTGGCTATCACACAAACACAGGAAATTAGGGAAATGATTGCCCCACTTTGCTGAAATCCACTGAGTTTGTTGTTGTTTAGACGCTCAGTCATGTCTGACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTTCATAGGCTTTCCCCGGCTAGAATACTGGAGTGGATTGCCATCTCCCTCTGTAGGGCATCTTCCCAACCAAGGGATCAAACCCACGCGTCCTGTATTGGCAGGGGGATTCTTTACACTGAACCACCAGAGAGGTCCCCCATTGCTGCTGCTGCTGCTAAGTCACTCAGTCGTGGCCGACTCTGTGCGACACCATAGACGGCAGCCCACCGGGCTCCACCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCTATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTTAGTCGTCTCTGACTCTCAGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGCCCCATTAGGTTTATCATAGTTTAAAACAGGAGACACACAGCTGCAACTTATTGTCATGAACTTCCAGGAAAGAAGATTCCCAGTGGGTTTGGTTATTGTCAGTAAACCCAGTTATATGAAAATCTAAATTTCCACAGGGTCACTGTGGGCAGTTGGACTCACTGCTTCAGGGTTATTTTTACAGCAGCTTTTGAAGGAAGATTACCGTAACCAGCCTGGTTCTCTGGGGCAGAGGGGTGGGTCTTCGCTTCTCTCCAGTCCTTGGCTAGTAACCCAAAGTAAAACCAAAGAACTACATACACATAAAACACACATTTATTTATTTACAGCTTTATTTAGCAGCTTTAATTGGCAGAGGACTGAGGAAAAAGGGTATTCATATACAGCAAAAATGGTTCAACTCAACTACTTTAAGGGTTTAAACCAGAAGCCTAGAACACATTCAGCTTCTCTGCTATGCCTTTCTCCCCCTAGATGTCTCTTCCTGTCTATCTTTTGGGAGGTAAATGATTCCAAGGCAGAATGACAAAGAAAAACAAAGGCATAGTGGATAAGAAAGGGAACACCATCTCCCTGTAGCTGCTTGAGGTCCTAGCTCCCCTCTGCTCCTTCATACTTTCAGAGTTTCCTGTTCGATCTCATCCTTCTTGCTCAAACTGTGGCCTGGTGAGGTAGTAACAGTAGATGGAGGCTCCAGAAGAGGCTAGCCAGAGCGGGTTTCACCTCCCATCCTTTTCATCAGACTCAAGTACAGGCTAGGTCATTGGACTGAGGATTAAGTTTCAGATTCTTGACATGCTCTTGGCTGTGGAAAACATGTTTTTTTAGGCTGGTGATGCATTTCACAGAGGGCCAAATGCATCCTGGGGCACACACGTGCCCTTCTCTCTGATGCATCAGAAATATGCTTACACACACCTCCTTGGGACGTCTCCTATTAGCTAAAGGGAGATGTGTCTGAGTACATTAACAGACTAAGCTGGTTCATCATCTGATGGTTTACATGAAGGCCAAGAAGAGTAAAGGTGTGTGCAATGGGAGGAACAGGACACCAGTTCCCTCAGGATTCCAAGTGGAAACTGACTCCTCCTGGTCTTTGGTCCTGAATGAGAAGTCTCCCTGCCAGAGGCTTCCAAGGAAACCATTGACAAAACAAAAAGTAACAGTTTCCAAGAGTACGGATTTGATTAAGGGGTCTTTCAAATGGCACACATAAGGGAGCACCTGAAGAAAATAAACACATTGAAGGCACAAACGTTTCACTCCAGCAGGACTGGAATGAACCTGGGTCAAAGGCTAGCTTTCCACTGAAGCTCTCCAGTTCAGTTTTAAAATCATTCAACTCTTCCTAGGACAGTTAAACCTTCAAAGCTAGAAAGTATGAAATTTAGTTAATTTAGAAAAACAGACACAAAACCCAGAGCCAGCTAACCTTTGCTTTCAGTGAGTAAAGCCAACACATTGCACATCTCTATGGAAATGGGTTTTGAGTATAGTTCATCGACAAGTATTCCCTCATCTAGGCACTCTGCTGCAATTCAGTGGATTTTCTGAGATGGTAACACATATCCCTGGAAGAGATAGAGCACGCAAAGGAATCCATGTGATACAAAGTGCTGAGTGCCAAGGTGGGGATGTGAGAGTGGGTACAAGGTGCTGAGAGACCCATGGTGGGAGATGGTCATCTCAAAAGAGGTAGTGTAAAAGAATCTAAAAAAGAGTGAATACATGTATACGTATAACAGAGTCAACTTGCTGTACACTTAGAACTAACACAACATTGTAAATCAACTATACTCCATTACAAAAAAAATTTTTTTAAGATGTAAATATATCCAAACCAGGAAAAAAAAAAAAAAAGAGGCAGCATGAGCTGGTCTTTGATAAAAACATAGGATATCTCCAAGCTAAAATGGAAGGAGTGAGAATTCTAGGCATAAATATAAATTTGCTAAAGCCATTGAAAATGTGGCTGTCATACATTTCAAGTCTAAAAACCAGAGTGATGAGAAGTGAGACAGGTGTGATAGGTTAAGGTGAGGCACGGCATGGAGAACCTTTCACACTTGGATGAGAAGGTTGGGGTTTATCTTGAGAGCAGTGGGCATCCATAGAGAGGAGCATCATGGCCAGGCTTGCATTTTAGAAAAGTCTATCCTGACAGCTCCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCTTGGGAAGGAAAGTTATCACCAACCTAGATAGCATATTGAAAAGCAGAGACATTACTTTGCCAACGAAGGTTCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTAAGGAGATCTAGCCAGTCCATTCTAAAGGAGATCAGTCCTGGGTATTCTTTGGAAGGACTGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGATGGGAGGGATTGGGAGCAGGAGAAAGGGATGACAGAGGATGAGATGGCTGGATGGCATCACCGACTCGATGGACATGAGATTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGGGGCCTGGCATGCTGCGATTCATGGGGTCGCAAAGAGTCGGACATGACTGAGCGACTGAACTGAACTGACCCTGACAGCTGGTTTTGAGCACAGATTTTAGCAGGAAAGAGACTAAGAGGGAAAAAGCCAGTCCAGGTATGAAAGTTTGGTTTAAGAGGTGGTTCTGAGGCTGACATCTTTTTTTGTTTTACCCTTTAAGTAGAAATTAATAGACAACAGTGAGGTCACAGCATATGAGTGCCAGGCAATCCCAACCTCGAGAGATTGGCAGTTCAGTGTGGAGAATATGGACTAGGAATTAGGAGAAGGTGGTGCTAGTCCCATCTCTGCCTGCAGTTTGCTGTGTGTACAGCAGTTACAGATGCTTTGCTGCTGCAGCTGTTTAGTCAGTAAGATATGTCCAACTCTTTGTGATCCCACGGACTGTAACCCGCCAGGCTTCTCTTTGCATGGAATTTCCCAGGCAAGAATACTGGAGTGGGTTGCAATTTCCTTCTCCAGGGGATCTTCCCAACCTAGGGATCGAACTCACATCTCCTGCATTGCAGGCAGATCCTTTGCTGCTGAGCCAACTATAGCTGCTCAGCCTCTGCCCATTTATGTGGAGACTTGCTCAGGGAGGCAGCAGGTTGGCATGGCAGAAATTGCAAGGATTTTGGAGACCACCACCCCAGGTTTGAATCTGAGATCACATATTTAATAAGTGCATGCTACTGAGAAATGCATTTCTCTGAACTCAGTTTCCCCATCTGTAAAATGGGGATAATAATATCTATTCCCTCTGGTGGCAGCAAGGATGACAGGTAACTAGGTTTGTGATGTAGCCAAACTGGTTTCAGAACAGGTGCTCTCCCCATTTATCTTCCATCCTGGAGGGATAGTGACAGGGACTCCCTCAAAACAGGCACATGCCTGCCCTTTCCACAAACCCTAGCAGTCCAAAATCAAACTCGGCAGCATGAGGAAACAGGTGGTAGCCTTAGAAGGCAGTGTGTTTGGTGAATATATCCTAGGACGCTGGAGAGAGGCTGGAAGAAAGACAGAGATATTAAAGAAATTCGGCTCCACTTACCAGGCACTGACAAAGGGCCCAGTCCTTGATGGGGTGCTTCCAGGCCCTGCTGTCAGTCCCAAGGCCTGTGCAGAGCTGGTTGCTACAGGTGCTATAGTTATAATACACAAGAAAAACAAGGCCTCTTCTCCATTTCTGGATCTCTCAGAACTCTCTCTGTGATTTGCTGGTTAGGAGAGGGGTTGAAATGTGTGAAAACTTCAGGAAATGGCAGAAAAGGCAGTGCCTGAGCAACAGCAGTGCACTTTGTCATGGATATTAATTTTCATTTGAACGTGGGCTTCCCTGAAATCTTGACCTCTGAGAAAGCTCCATTGATCATAAAAGGTGATTGTGGAATATCAGTCGGGCTATTGGCAGGAGAAAATTTGTCCCCAAATTGTCTGCTCCAAACCACACAGAACTCATCAAAAGGAAATGGGGTTTTAGACATTTAATCAGTCTTGCTTCCAGGAAAGTTATTAAGAATCTGTACCACAATGGTAGTTTGTATAAACATGACATTTTTTCCTAATTCTTTTTTTTTTTCTTCCTCCACTTCTGTCTCTGTGCCCTGATAAAAAACTAGGTGGCGAGGTGGGGCAGGAAATGGTTTTTTTCAGATCACTCTCCTTTCGCACAGTAAAAGGAAGTTCCCCACAGTTGTGGTTGTCACATGTTTTTACGTGTTTTTACGTCCTCGCTTTATCTACCCTAACCACTCCTATATTTCTGACATAGGAGTAGTGGAAACACTTTGCTTCTGATAGAATACCAATGAGGTGATATCTAGTTGCAGTTAAGTATGTGTAATAAATAAGAAGCCCCCTCCCAAATAAAAAGTTAGTATGGAATTACCATTTTATAAGTATTGTTCACTAAATAAATATTGAGGCCCTACTGTATGTGGGGCACGGTGACAGTCTCTAGGGATGCAAAGATGAGCCATGTGTGAATTCTGCTGTCAGAATTCACAGCAGAAAAGTGTATGGTCTACTAGGAAGTCATATGTGTTGATGTAGTGAACTCAGTGTATGGTAGTGAGTGCTCAGGTCCTTAAAAGGGATAGATTCAGGGCAGGGGAAGTTCAGATTACTGCTAGCACTTTGGGGGTAAAGGAAAATGGAGGTACTGGTCATGCATGGCTTCCCAAGCAGATGGCATCGAGAATGAGACCGTTTAGAGGAAGGACATTCCGCTGTGCAGTGGAGGAAACTGCACAGCAGGAGCGTGGCAGCGGAACTCTTCACAGTCTGGGGAAAAGCAAGGAGCTGGAGTTGCATTATGTATTTTTTTTATTTTTTCCTTTTCTTAAAGATTTTATTGGCGCATAGTTGATTTACAGTGTTGTGTTAGTTTCAGGTATACAGCAAAGTGAATCAGTTATACATATATCTACTGTTTTTCAGATTCTCTTCCCATATAGGCCATTATGCTATACAGTAGGTCTTTTAAATCCTATATGTAATCTCAGTAGAAAGAACAGAAAAACTAAAAGAGTACAAGCTACTGCCCTTGATGATGCTATATCTTAGAATGAGCATGAAAAAGAAGACATGAATCCACTGTGGGCCAAGGACTCCCTGCTTCTGATGGTGAGAGCTGACAGCATGTCCTGTACTCTGGGGAAATTTAAAGAATTTTCAGGGAAAAATATTGATTCTATGTAATATTTATCTTATGGCTTATGATTATGATCTAACCACAGAGTAAAATGCATTTCCCATAGAGTGAAAGGGGTTTCCCTGGTAGCTCAGCTGGTAAAGAATCTACCTGCAATGCAAGAGACCTGGATTCAATTCCTGGATCAGGAAAATCCCCTGGAGAAGGAATAGGCTACCCACTCCAGGATTTGCGGGTTTCCCTGGTGGCTCAGATAGTAAAGAATCCACCTGCAATGCAAGAGACCTGGGTTCGATCCCTGGGTTGGGAAGATCCCTTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCATGGGGTCGCAAAGAGTTAGACACAACTGAGTGACTAAGCACAGCACATAGAGTTAAAAAGGAAGAACATTGGAAAGGCAGATTTAGACCAGCTAGTAGAGAGAATCTTGAGTGCCCAAATGCCATTTTGCAAGACACTACATTAAATCAGTGTTCCCCATGGCTTTCATTCCCTACTCACGTCTTCCATCAGGTAGAAACTATTCTTTTCTTTCTGTAGTCTTTCTCTTTTGTCTTATGGGAATGTGAACTCTGAGATTGAGGAGGGGGCAGAAAGCAGTGAAACAGTGACATGGCAGAACCCAGTAGGTGGCTGATCCTGCCACACCCTCCAGCACCTGTCTTCTCAGAGCTCCCCTGTTCACTCAGAATGGTTACCTGGTTACTGTTTTTCTGTCGCATATAGCCATCAGCTACATTGCAAGGAAAACTAAATGTAAAATTTGGCAGGGCCATATTAAAAAAAAAAATGGTAGTGGAGAAGGGATGTCATGGCAGTTGGAGATTGGAGGACTGGGTTCAAGTCTTCACCATGCTTACTTCCTAACTGTGCAATTTGGGGCAAGTTCCTTACCCTCTCTGAATCTCAGTTTTCTCCTTTTTCACAGGGATAATGATGTCTACATGTAGGTTTTTTGTAAAGATTGAATGACTTAATGTGTACTTTACAGAAAAAAAAATTAGACAAATCTTTATTATTATTACCCTAAATGGCACAAGTTTTACTTCCAAGAAGAACTGGCAGTTTTAAGAATCCATAAGTCACTTCAATCATGTTTGACTCTTTGCAGTGTTGTGGCCTGTAGCCAGCCGGGTTCCTCTTTCTGTGGGTTTTTCCAGGCAAGAATACCGGGGTGGGTTGCCATTTCCTACTCCAGGGGATCTTCCCGACCCAGGAATCGAACCCGCATCTCTCATGTCTCCTGCATTGGCAGGTGGATTCTTTACCACTGGCACCACCTTTGAAGTCCCCCAAAATGTTGATGCTTCCCTACAGTTGTTTGTGCACATCACATTAAGCAATTTCTTTGGGTCTTTCTTTTCCAGCTAGAGTCAGGATTTCTTAAGGGAAGGGAGAGGTTTATTCATCTTTATAATTACTTTTGCGTTGAAAAGTGTCTGGCATAAGGTAAATATTGCTTGAATGAATGGGTTAATTGTGAATTGCAGAAAGTGTCCCAAATTAGGAAAATCTGTGTTATTTATTTTTAGTCCACTACTTTATTATTAGAAGATAGTCAGAATTCTTGAGAACTACCTTATTTTAATTCAGAGTGGCTCTATATTTATTGAACATCTGCTATGTGCCAGGCATAAAATCCCTTATCCTTGAAGAATCTGTGGTCTCACTGGGGAGACAGACACCTGCTCTAATAAATCAAAGACAGCCTGAAATGCACTATTACAGCCTGAGCACAGGTTGCTGACTGACTTGTGGTTTCCTGATCAGTGTGGGCTCAGCGTCTATGGGACTGCCCATCAGGAAAGGATGTTATGACATGAGAAGTAGCAGTGAGATGACTTCCCAGAGAAAGAAGTAGAACTCTGAGCAGGAAGTCCTGTTTGTTAGTGGGTGTCTGAGTTACACACACATCTCTCCCCAAGTGCTCTCTTATCCTTCCCCTTTGGCTCGACCTATATTATTGTTGTTACTGAGTTGGCCTGTGCCAGGGCCTGTTCAAAGTCAAAAGAAGTTACTTTTCCTTATTGAGGCTGCTAATGGTACCATCACTCCTTTCCTTACCCCCTGATCCTTGCCATGAGGAAGAGGATTTGGCATTTCTTGTGTGGGCCTAAGAGGCAGAACTGTAAACTGTAGGAAGGCAAAATTTAGCTCAACATAAGGAAAGCTTTCTAAAAGACAGAACTATTTGAAATTGGAATAAGCAGCAATGCTGAGTTCCTGCCTAGAGGAGTGAGATTTACAGAGATTGAATGAATGCTAGTTGTATGCTGTATCAAACATCTTATGGGGACCGGGATTGACTGTAATAACAGCTTCTCCAACTTTCACGTGCATGCACATTATTGGACATCTTGTTAAACTGCAAATAAGAACCATACAATAGTGAGAAAGTGAGCAACAGTCCATGGGGTTTACATTTAATGGAAGAGGCAGGCACTGGTCACAAAAAAATATCTGATTTCAACCTATTATATCCTTCAAAGGGAAAAAAAAATAGAGAAAATGCCATGGGAGAACAAGATCTAGATTTGGAGTAAAAGGGAAGCTTCCTTGAAGAATATTGGTCTGTAATCTACAGGATGAATACATGTTAACCTGGTGAAGAGGGAAGAACAGGAGCACAAAGCTAAATAGCTTCATTTTTTCACTCAGTCTCTCCCCATCTCTCTCTGTTTCGTACCTTCTCCTTCCCTCCCTCCCACCCCTTCTCCCCACTGCCTGTCTCCCTGCCTCCCTGCCTTCCTCTCTCTCCTAGCAGAGATGTCTACTGCATGGCTAGCTAGAATGCACAGGAATCCAGCAGTGTCTTTAGATACTAACACGAGGCAGGTTAGGAGTGCAATCTGTTGTTGCTCGCTTTGTTCACTGTTCTAATCCCAGTGGCTATAATACTGCTTGGCACAGAAAGTGAAAAGTTGCTCATTTGGTGTCCAACTCTTTATGACCCCATGGACTGTAGCCCACCAGCCTCCTCTGTCTGTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCATGCCCTTCTCAAGGGGACTTTCCTGACTCAGGGGTCAAACCCAGGTCTGCCGCATTGTAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGTTGTTGCTCTGCTTTGTACACTGTTCTAACCCCAGTGGCTATAAAGCTGCTTGGCACAGAACAGATACTCAAATATTTGTTGAAAGAAGCAATTAGTCAACTAGCTAATTAGATACACAGAAAGTAGGAGGGAGTTACAGGGAGGCTGAGTTCATCTCAGGAAGAGAAGGGACATTCTAACAATGTTCAAGGCAACCAGATATAATAGAAATATCTCTGGACTTGGCATGAAAGAAATGAGCCACTTGTTAATTTTAACTGTGGCAAATCACCTAACTCTCTGTGCCTTAACCTTCTTATTCATTGAATAAAGATTATCTTTGCCCTGACTAGTTCATAGAGTTATGGTGAATAAAATAATAAAAAAATAATAATGTAAAGTACTATTAAATATATTTTTATTATCAGGGTGTAAAAGTAAACTCCCAGTCTGGCTGGTGTCAGGCACTTTCTTTGTGGTATCTTGTAGTGGAGACTCTTGTCTTAGGAGAGAGTTTGAACTAAATGACTCAAATGCTTTCCAATTCATATATTCTATGGTTATGACACATAAATCCATATGTGTGGGCATGCATGCTCATTCCGACTCTGCAACCCTAAGGACTGGAACCTGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCTTACCGACCTAGGGATCGAACCCACATCTCTGGCATCTCCTGCTTTGGCAGGCAGATTCTTTACAGAATCTGTATTTTAAAGTTATGAGTACATGAAGCTGATTTAAAATACATATTGGATAAAAATGATGTAGATCAAAATGCAAGAAATACTGAGAAGCTTGCTTTACTTAATTGGACAAAGATCTTAAACTGAAATCTGTATATAGGAAGGGGGAAAATCCAAATGTCTAATTTCCCCTACAATTTATGAACTCTCTGTATATCAGCTCTGCAGCCATGTTTACCAAGCTGCAATAAGAAAGGGAGGTTCCCTTAAACTAAAATGTCAGCGATTGGGGTTTTCAGGAATTTCAGATTATTGGGAAGGTCTCAGACACTTAGTGACTCCCTAGAGATCTGAAAATCTTACTGACTGCTGGCAGTAGTTTGCCTGGAGACTGAATTTTATTTCAACCCTTTTGAAAGAGTAAAGAAGCCACAAATCCAGTAGCTGTTCAACACAACAAAGAAGGTGCCTTTGGCTTCTAACAGGAGTGTCTCTGAATTCCTCAAGGAATTCCAGGCCTAGGGTTGATCCAGCTGGCAGGAGGTATCGATCTCCACTTGAATTCACTGAATAAATAATGGTTGCCATAGTTATCGAGCAGTCACAACTGGTTGGAGAGCAGGGAAAACTCTGAGGCACCTTCTGCGAGTTTGGCCACGAGAAAGTCTGGTTACAGGGTTCCATAATCAACCCCCTCCTGAAATCCAGCCCACACATTGCTCAGTTTCTTTCTTCTGATAATGAATATAGGATCCTGAATATAGTGCAAGACATGAGGCATGGAAGGGAAGAGAAAGCTTAAATCAATGGATTGGTATTTTATTCTGGGAAAAGCATCTCTCCCTGCATTATGAACCTAATTTGATATATCTCAGGATTTAATAGAATTTACTATCAGCAGGATGACTGTTTGATCATGTTACAGCAACGAAAAGGTTTCACAAAGGACCAAATCCCAGTTTGTTCTCTTTTAACATTGTTTGTTATACCAATACCATTAACCTGGATATTTTAAAAGAAAAGAGTGATCTGACAGTCTCATGAATATTTTCACTTTTCTGTTTCCATTCACTCTTCTCTGTGTGTGTTCAGTCGCTCAGTCGTGTCTGACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTTCTCAGTCCATAGATTTTTCCAGGCAAAAATACTGGAGTGGGTTGCCATTTCCTACTCCATTCACCCTTCTCTAGATATCAGAATAATTTTTGCATAGGTGGTAGCACAGCTTAGATACCATTTTGTATTCCATTCTTTATTTAATGTAATAGTATATATTTCCCCATGTTGCTTCACAGCCTTTATGTCCTTTTTGATGTCTCCAGAATCTTCCATTATGAGGACATACTGTTTTTTACTCAGCACTTTCCCTATTTTTCTTCACTTTATCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATTCTTTTGTTCAACATTTTCTTCAGATAAATTCCCAAGAGTGGGATTACTTGGTCAGAGACTATGGACATTTTATAGCTTTTGAAATTTGCTGCCAAGTTTGCAGCCAGATTTTTTGCTCTTGAGGTTGACAATAGGCAGCACTAGTGGTAAAGAACCTGCCTGCAGTGCAAGAGACCTAGATTTGATCCCTGGGTTAGGAAGATTCAGGAAGATCCTCTGGAAAAGGGGATGGCTACCCACTTCAGTGTTCTTGCCTGGAGAATTCCATGGACAGAGAGGCCTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGCCAGACATGACTGAACGACTAAGCACAGCACAGCACAGCATACTGAGAGAAAGAGGGCTTCCCAGGTGGCGCTAGTGCTAAAGAACCCACCTGCCAATGCAAGAGACATCAGAGATGTGAGTTTGATCCCTGGGTCAGGAAGATCCTCTGGAGTAGGAAATAGCAACACACTCCGGTATTCTTGCCTGGAGAATTCCATGAACAAAGGAGCCTGGCGAGCTACAGTCCATGGGGTCTCAAAGAGTCAGACATGACTGAAGTGACTTAGCATGCACATACTGAGAGATGAAAACTTTGACTGAGATAACAGGGGCCAACGTCTTCTTTCAGGAAAGAGGCTCTGAAATCTACACGCTGAGGGAGAGCAAACTGATTGGCACTGGATGTCAGGCTCCTTTTTGTTCACAGGAGATACAACATTGCTCTGGAACCAGAGGACAGAGGCTGCCTCAGAAGACTGGGTTCAAATCCCAGTTCTTAGCAGTTGTGTGACTTTGGGAAAACCATTTAACCATCTATACAAAATAAGACATCATACTATTTAACATAGGGATAATTTTATATATTATTTTATAAAATATAAGATTACTGGTGTTCATGTCTTGCCACATTATGAAATGCTTGCATTACCTCCTCAGGTCCCCCTCTTCTTCTCTTTGACTTTTCCATCTTCACACATGAGAAACATGTGCCACGTATAAGTCAGTAGGAGTATGCGAGTGGGGAGGGAGGGGATAAAGAAAAGAAAATCTAGATTCTTCTCAATGCTGGTTAGCATGAAAACACAAGAATGCGCTTTGTATTGGGGCAGCTTTTGCATTCACAAATGGAAAATTACAGCCCCCACTACCAAGTGAGTCTGTCAGGATGGCAAGATTTTTTCATTTACCTGGATGTGTGTCTGTGTCACTCTGAAAAGAGTTGCTTCCTCATGGGGCTTTTGTAAGGCCTCTGTCAGATGATGTGTGCAAAATAGTAACCACCCTGTTATTCATTCACTGTGGCTCTGTGCTGGGAACTGTGTGTTTCATCTGTGTTATTCTCCCAAGCTGGTCCTCCTAGAAAGTCTGAATTGGGTATGATTATTATCTTCATTTTGTAAGGAAATCATGGCTTAGACGTTAAGGGACTCTAGGGGACACTGAGTAAGTGACAGGACTGAGATTCAGTCCCTAGTGCTGTTTGATACTGTGTGCGTGCCTGCTAAGTCACTTCAGTGGTATCCGACTCTTTGCGACCCTGTGGACTATGTATGACCCGCCAGGTTCTTCTGTCCATGGGGATTCTCTAGGCAAGAATACTGGAGAGGGTTGCCATGCCCTCCTCCAGGGCATTTTCCCGACCCAGGAATCGGACCCGTGTCTCTTATGTCTCCTGCGTTGGCAGGCGGGTTCTCTACCACTCGCACCACCTGGGAAGCTGCATTTGATACTTAAGGCCATGAACTACCTCTAAGAGGAAGGGCACTATGACTGTAAAATGCCATCCCAACTGGCAGAACAGGACACAGTCCTCTGTTAGGGATTCAGGGTTTTTTAAGATGTAACTGCCTCCTAAATTTTCCTATCCTTTTCTATCCCTCTGCAG
Seq C2 exon
AACGACATGGGTTAAAAGAACCAAAGAGAGTGGAGGAGCTATGCAACAAGATCACAAGCAGCTTAAAAGAGCACCAGAGTAAGGGCCAGGCTTTGGAGCCCACTGAGCCCAAGGTCCTGCGTGCCCTGGTAGAACTGAAGAAGATCTGCACCCTGGGCCTCCAGCGCATCTTCTACCTGAAGCTGGAAGACTTGGTGTCCCCACCTTCCATCATCGACAAGCTCTTCCTGGACACCCTGCCTTTCTGAGCAGGAGCAGCCTGAGCAGGGAGCTGCCTCATCTGCTAGCAGCTGCTTGCTAAGTAGCAGAGGGAGGGGGTCTGGACACCTACCATTTTCTGTCCTTCCTTAAGAGAGAAAACAAGCTCCTGTTGAAATGAAAGACTTTTTTTTTTTTTTTCTGGCACTTTTCCTTACATCTGAAAGCCAGAAAACTTGCAAAGTATTGTGTTGGGGTTGTGTTTTATATTTAGGTTTTGGGGTTGGGATGGGAGGTGGGTATAGTTCATGAGGGTTTTCTAAGAAATTGCTAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000001864:ENSBTAT00000002429:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.037
Domain overlap (PFAM):
C1:
PF0010425=Hormone_recep=FE(32.8=100)
A:
NA
C2:
PF0010425=Hormone_recep=PD(33.3=73.5)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]