MmuINT0110555 @ mm10
Intron Retention
Gene
ENSMUSG00000028341 | Nr4a3
Description
nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
Coordinates
chr4:48070990-48086445:+
Coord C1 exon
chr4:48070990-48071168
Coord A exon
chr4:48071169-48083104
Coord C2 exon
chr4:48083105-48086445
Length
11936 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGC
5' ss Score
9.88
3' ss Seq
TTCTCTCTGTCCTTCTACAGAGC
3' ss Score
11.3
Exon sequences
Seq C1 exon
GTCAAACACTGCTGAAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCATCGACTTCAGTGCCTTCGAGGATTTGGGGAGTGGCTCGACTCCATTAAAGACTTTTCTTTAAACTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGTATGATCACAG
Seq A exon
GTAAGCGTCAGCTGCCGAAAGCCGGCGACCGTGGCCTTCTTTCTCTTACCTGTGACCAGGTAGCTTGCGTGTTTCTGTATAGCTTACCACCAAGTTTCACTACTTTAAGCAAAGAAAGCATGTATCCACAACTTACTCTTATGAGCTTCTAGGAGAAAGGATCCATACTATTGAGTTGATATCAGAGCCCAGTTCCTCTGGAGCCTGTTAGCAGTTGACTTGGCTACTTCAGGGCTGTTTTTACAAAGGATCTCCAAAGATCATCTTAACCAGCCTGCCATTCCTGTGGGCTTCTTTCCAGGTCTTGTGTAGAGACCTAAAGTGCATCAAAGAGCTACAGCCTATGGAAGACAGCATCATTTACTAATCCTGGCTGGGAAAGAATGGAGAAAAATGGGTATTTGTCAAAAAGTGAAAACGACCCAACTCCACAGCCTTTTGAAAAGTTCAAAAACAGAAGTATAAAGTTTGTTCCGTTTCTAGAGTTGAGGAGCTAGCTCAGATAGTAAAATACTTGCCTTGCAAGCCTGGGGGCCCAAATGTGGGGTCCCCAGAACCCACATTTAAAAATGCTAGGTGTGATGGCATGAACTCATGATGCCAACACTGAGGAGGTAGAACAGGATGATCCCTGAGGGCTTACTGGCCAGCCAGCCTCACCTAACTGCTGAGCTCCTGACCCACCGGTGAGAGACTTCATCTCAAGAAGGGTAGATGATATTCCTAAAGAAGATAGCCAAGATGTCCTCTAACGTGCACACACACACACACACACACACACACACACACGCTCAGTTGCTACATTATTCTACTCTCTTGCTACATGTCCCATCACCCTGTACCCTGGGGGTGCTGCTCTAGGCTCCCCTTCACCCTTCATCCTTGCAGTTTCTTGTTAAGTTGGATCTTCATCAGTGGGCCTGGTGAGAAAGTGTCTTGAGGTGCCAGCTCCAGAAGGGGTTAACTGGATCTGAAGGTTCCTCCTCCCTTGGGTCAGACTCAAGCCCAACTTGGCTGATGGGCTGAGAGCCAAATTCAGACAGGCTGCGCCCTTGGCTAGAGGAAATATTCCCCAGATAGGTGATCCTGATCATGTTCGTCAGCAACGCTGGCCTCTCCTTTCTAAAACAGCCTTGCTTTGCAGAAGCCAATGCTTCTCAACCTATAGATCACAAATCCTTTGGGGGGTCAAGTGACCCTTTCACAGGGGTCACCCAAGACCATCTTTACATTAGATATTTACATTGCAATTCATAGCAGTGGCAAAATGACAGTTATGAAGGAGCAATGAAAATAATTTTATGGCTGGAGGTCACCACAACATGAACTGTATTAAAGGATCACAGTGTTTGGAAAGTTGAGAACCACTGGCCTCAGCACCTGCATCTGCTTATGTCAGCTGTGAGCCCAAGTTTGATGTGTCTGTGTGCCCCCAGCGGCCAGGCTAGGCCTGGGCCCGACTCTCCCCTCCTGGTCTTTGGTCCTGGGTGAGAAGCTTGGTTCTCACTAGGGCTGTCGTAGTATTCCAAGGCCGTGAAACAAAAGCAAAGACAGCCTCAGAGGGCATGGATTCCACTGACAGGGCCTTCTGATGTCATAGCAGAACACGTAAAACAAATAGCTGTTTAAGACCCAGGCACTTCACTCTAAAGACTCTAAGGAGACTAGCCCCCAAGGTCATTTTGTCATCTAGCTCTTCAGCTCCACTTCAGACCCATTCAGCATTTCTGGGACAGGTAGACATCCAAAAACTGGAAAGTATAAAGTAGGGCTGAGTTTATTTACAAAAGGCAAACTTGAGAGGGTGGGGCTTTAGCTTTCTTCAACAGTTCCTTGATACAGTTCCTTGCTGTATCACTAGGGGAATAGGAGTTGAATATATAGCCACTGGTCTAGGTGCTGACTCACATGTCACTGGGTTTTCAAAGATGATGACGTGCATGTCTGGAGGACACAGGATGTGTAAATTCATCCACAGGATGCTGAGGGTTGAACAGAATGTGGAGATGCTGGAGAGGGGATCAAGTGTCGAGAGACCACAGACTGGGGAGCAGAGAATGTTCACAGGCCAGTGTGGTGTGGAAAGAATAATAGCTCTAAGCATAAATAAAAATCTCCCAAAGCTATTGGAAATATGACTGACCTAAGTGTCACAAAGGAAATGGCTAAAACATCTAGTGTTGGGAGAAGCCACTAGACCTACAGAAAGAGAGTGTCACGGGTTACAGAACCTTTCCTTAGCCTTCCGCACCCAGTGAGACCCAGGCATGTGGGGTCTGTCTTGAGATCAGTGGAGAGCCACGGAAAGCTTTGAACAGTGGAACGATGGCCAGACTTGCATTCTAGGATGATCTACAGTGGCAGCTGGCTCTGAGCACAAAGTAGGTCAGGGAGAAGCAGAGGAAACAGCGAGTCGTATAGCATAGGGGCTGAGGCTCACAAGGAGAGCCTGGCTCATGAAGCCAGTTCTTGCTTTGTTTTGTGCTATGGAGGTTAATGGACACCAGGGTACCAGGTGTTCCCAACTCATAGGGTCCACATAGCATCCAGAATAGAAATTAAGCGGAAGGTGGTGCTAGTCTCTGCAACCCATTTGTGCTGTGCTGTGATCAGAGCTGACCAACCCACTGCCCACTTGGGTAGAGATTGCTGGAGGAAGAGGCAGTTTGGCATGGCAATTAAAACATGGGTTTCTGGTTCTGGTAACCCCCTTATTAAACTGGAGTCTGGTGTTTCTTTAGCAAGAATTATTGAGTAGCATAGCTGTCTTCTCTGTACTTGTTTCCTCATCCACAACATGGGGATAATAACATCCGTTCCATGGGGTGGCAGTGTAGGTTATGAAAGACTGGGTTTATGACACAGCCAAACTGGACTCATGGAAGACCTTAGATCTCCTTATGCCTTGGATCATATCTCCTTGGAGTGGGATTGACAGAAGCTCCCTCAAGATGGGGTCTGACCTGTCCTTCTCTTTGGAAACCTTGAGCAGTATAAAATCAAACTCAGTGTCTTGAAGAAAAGGTGGTAGCTTTATATGGCAGTAAGAACTCACACCTATAATTCCAGCACACAAGAGACTAAGGCAAGAGGATTGTGGGTTCAAGGCTAGCTTGTCCTACATGGTGAGTTTAAGACCGGCCCGTCTCAAACAAAACAAGGCAGTATAGAATGTTTGGCGACTATTTCCTTAGCCACTTAGGTGACTCAAAGGACAGTGATCACAAAAGAGTGAGGGAGACTGGATGGACCGAATGATTTGTATGTAGGTCTTTCTCAAGGGTAACTCCAGTTGCTACCTTCATTCCTGACAGCCTTTCTAGAGCAAGCTGTCCGAGGTGCTGCAGATACCACACAAGCAGAATTAGCCCTCTAATCCCACAAAACTCTTGGGATTTGGTGACTGGGAAGGATCTGGGATGCATAGGAGCAATGGGCAATAGAGGAAGAGCAGTGCCCAGGAAGCACCCCCACTGTTGTGAGCAGCCACTGTCCGGTGAGTGGGCAGTCCCAAGGTCTTGATGTCTCAGGATGCCTCATAGTCAGAAAGTGGAGCAACAGATGAGCCCTAGGAAAATTCATTCAAAAACCTGTCTTATCTGAAACCAGACAGGCACCTGGGAAAGGGAGGAGGGATCTTAGTCCATTAGCCAGTCTTGCTTTCACAAAAAGCCTTCAGAAATTGGATAGTGGTGGTAGTTTACCCAAACATGATGTCTCTCCCCACCCACCAATTTATTTTCTTCTTCCTCCCCTGAAGTACTGGGTGGTGAGATGGGACAGGAAGTAGTCTCTTTTTGATCAATCTCCCATCCTACAGTAATGGGGAGTTCCCCCACAGTTTGTGGTTTTCACATGTTTTCTGGGTCCCCAGTTCATCTGCCCTAACCATTGCCTCCTGTCAAAGCCACATCCCTGGAGCAATGTGAAGGCTTTGCTTCTTTGACATTGATGGGGTGCAGTGTGTTGTTATCGGCTTGCCACCCTCCAAACAGAAAGTTAGTGCGGTGTTACCTCTTTACAAAGTTTAGGCATTGGGGCCTCTCTAAGCCAGGCTGTCGTTGTGCAGGAATAGGAAGCTGAACTGGGCATGCATCCTAATAACAGGAATTTTGTCATCTACCAAGATATGGTATAAGGAGCTCTATGCATGGTGGTTAGCCTTTAAATTCTTTGGTTTAGTTTGGTTTGGTTTTTGGTTTTCTGAGACAGTGTCTCACTATTTAGCCCTGGCTGTGCCTGAACTCTGTAGATCAGGCTGGCCTGGAACTCACAGATCTGTCTGCCTCTGCCTCCAGAGTTCTAGGTTTAGAGGCAGAAGCCACTATGTCTGGCAATGTTTAGGTTTCTGAAGGGATAGGTTCAGTGAAGAGGAAGTCTGGGTAAACGGTACGTTATGGGGAATTAAGAACACTCAATGTGCTGGTCATGAATAACTTCCTAACGCAGTAGCATTTCGATGAAAAGGTCACTCTAAACCAGGGAAACCAGAGATCCAGGGCATGACCATAAAACAGCCCAGCACAGTTGTGGGGAAATCATGGACAGTCAAAGTGCTTTCTTCATGGATTTAATCATATACATGACCAGAGCGGAAAGAGGAGAGCATTTCAAGGAGTCCAAGCAATGATTCTGAACGACTTCCTGTTCTGAAGCAAACGTGAGAGCAGAGGCAGGAATCTACTCTGGAAGATAGTGTTGCCACCTCCCGGGGCACCAGCTTGCACACAGTCTCTGGGCTCTGGGAAAATGTAAAGGCTTTTCAGTGAAACAACTGACTCATTGGGATATTTGCCTTGTTACTATGAACTATAACCTTGGGGTATAAGCATGAATTTCCTATCCAGTGATCGATAGGGGAATATGTTCTAAAGGGTCCTTTGGAGCCAATAGCAGAAGAAATTTTGATGCCCAAGTGGAGTTTTGTTTTTTGTTTTTTTTTTAATTTCCCAAGGTGTTGTTTTATAGATTCAAGGTAGAACAATGAGTTCTTTCTCTTCTATCTATTTTTCCTGGTCTTCTTGGAACATGACCTCTAAGATGGAAGAAAGGCAGATCTAGGGGCAGTGTGAGATCAGCACTTGGCTGATCCCTCACCCTGTCGCTCCAGAGCATGTCTGCTTGCTTTAAATATCTGGCCATTCTGATTTTTCCATCAAATAGAGCTATCAGCCATGTGGCAAGGGCAAGTATGGATGTGGAGATTAAAGGTCTGAGTTCAGGTCTTCACATGGCCACACTTGGGATATACTTTGGGGGCCCAAACAAAAGTCTAAATCCTGCTGTCTGGTGCATGACCCGTATTCACCGAACACGTGTGTTGTAAATATCAAATATCAGCAAGTCTCTCAAATTAGGAAAATCTAAATAATTTTTAGCCCACCATTGTTATTAGAAAATAGCCTGACTCCCTGAGAGATGCCTAATTTCACTTAGATTAATTCAGTCGGTGTCTGTGGCGCTCTGCCACATGCCAGGCGCAGAGTCCCTTCCCTTTAAGGAGTCCATAGTCTTAGAAAGACAGACAGAAAAGACAGCTTTGTGCACCTCGACCTAACTTGTGGCTCCCTGACCAGTGTGGGTTCTGGGGCTGGCCAGCAGTTGGCAGAGGACACATGGTTCAATAAGTGGCAGCAGTGTGACTTCCTAGAGACAGAGGAGGGGCTCAGAGCAGGAAGTCCTGTTACATGTTTGCTGTCTCCGGAACAGCCCCATTTTTTTTTCTTCCTCCTTGGCTAGAACTGTGTCATCATCTCAAAGTTGGCCAGTGGCCCAAGACCTGCTCAAGAAAGCTGGCTTGGGGGGATGGGCTACTGTTGAATGCTATCCGTCCCTGTCTCTATGCACTGCCTTCTGCTCTGAGGAGGAGATCCTGGGGCTTCTCTTATCAACCAAGAGGCAGAAGTGTGAACTGTGAAATAGCAAACGTTAGCTCAATGTAAGAAACCAGCATCGAACATTGACGTGGGAACAAGCTTCTTTGGGAGAGGGCTCTCATAGGCAGTAAAATAAGATGCCTTGGGAAACGGGGTTTACCGAGATGAGGTGAACATAGGATAGAGATGCTGCCCAGCAGCTTTGAGGGCAAGGACTCCCTAGGGCTGAGCTTCTCCACCCGGCATACAGAGCATTGGACATAGGGTTAAGTTACATATGCTAGTTGTGTGGGCCTGGAGCAGGGCCTACGGTTGTGCGTTTCTCAGAGGTTCCTGGGCTTTGTTGACTCCTCTGGGATGCGAGCCACTCTTGAGGAACAACGGAACCTATTGTCAATTAGGACTCTTTAACATTAATGATAGCTAATATTTTTTTAGACCGTACCTGGCACTATGCCAAGAGTTTCACATATGTGGTTTTAGTGTTGCTTAATAAATCTGGAAGTACCTGGGATGGATCACAGCAAGGAAGCCAGTCAAAAGCAATTAAAACAACGCAGGCAGCAGATATTAGAGATCTTGTCCAGAGGAAATTCTCATTGAGAAAACACAGATGCAAGGAACACCACACAGAGAGTAACTAAAGATTCTGGAATAGGACCCCAGGGAAGGAATCCCCAGAGGTTATTATGAGTTTGGGAGAAGGGAGATTTCTGTACCATTAGCAGATGAACTCAGAGCCATGGCTGGCACGAAAGGTAATGAATGGAGTTTTAAAAACAGCGTATTTGCAAGTATTTATTAAGTGTCTACTATATTCCAAGTACCTGACATTATTCCAAGTACTTGCTATGTAAAGATCATTTCATTCTCAGAGCAAGACAAAAAGCAACTGGCATTTTTAGCCCTCTTTCACAAGTGTGGAAACGCCCCAAAGTCACCCAGCTCACAACTGACAGAGCTGAGAGGCACGAAGAGGGGGGCTTCTGCCTGGGAAGTCTGGGAGTTTGGAAAGTTCTTTAGTACCGGAGCTTCTTAAGGGCTCCCAGCTCATTCTTTTCATTTGAGCAACTTTCACGCTGAGTATCACTTAGTCATTTCCTAAATGACTTGGATCTTCCAACTTACAGATTCATCTACCTGATGTGTATTCAGCACCGTTGGTGTGCTAGGTTTGGTGCAGGACATGGGAGCACAGAAAGCAAATACAGGACACTTCTCCCGGGGAGCTTAAACCCAAGGAGAGAGGCAGGCGATTGTCACGTGAGGATCAGATTTCAAACTTGCTTGTCCTGCAAAGGGAGACCCTGTACTAGAAGAGAATCTGACCTAGACAGGAGCCAAGGAGGAAACTTCCTTGACAGAATATTGGATCTGAGAGGAGTAGATCTTAACTGGCCGAGGGGGAAGTACATGAGCAGTGCTTTGAGTGTCTCATTATTCCACTCTGTCAATCCCATCCACTCCCTCTACTCCCCTCTTCTCTACACCACTCCTCTTCCTCCTTCCTCTCCTCCTGCCTTCTCCTCTTTCCCTCTGACTCCCTCCTGCCCTCTTCACACTCAGCACAGCCTTCTGTGACATGGATATCTAATATGCTAATAGGAATCCAAACATGTCTTTAGATGCGAACTGCCCCACACAGTAGATTGAGCTGTTTCCTTCACTGCTCTGACCCCACTGGCTACAGTACTGTTTGCCCCAGAGTAGGTACTTAATAAACATCTATTGGAAGAAGTAATTAACCACTAGTTAATTAGGTCCACAGAAAATAGGAGGTTGCTGAAGGAAGGCCAGTTTATCTCAGGATAAGGAGAAACTTTCTAACAGTTAGAGGCAGTTGAAGGCAGGTAGTCAGCTGGTGGTGAGAGAAATTCTCAGATTCGGTTTGAAAGAAACTGGCCGCTTGCTAACCTCAGCCCTAGGCAAGTCACTTAACTCTGAGTCTTCTTACATATTAATTAGAGAAAACATTTGCCTTGCCTCATTCTGAGCTAAAATAATCTTAGTAAAAGAGTATAACCTAAAGGCTATTAAAGGAATTCTATTCGCAGGTTAAAATGTCTGACCTGCCAGGGTAGGTGGAACCTGATTCTGGGGTTTGTAATGCCGTAAGTGCAGATTCTTCTCTTAGGTGGGAGTTTAAACAAAGCAGATAAAATCTCTTCTCATGTACATGCACAGTGTTTTTGATGTATGTCTAGTACTTAGCCACGACTCTAAGAGTTCTGTCTTGACATCTTGGAAACATAACCCTGAAATGCAGGATTGTATAAACCCAGTGTATAAAGCTCGTTTGGTTAAATCATTGGAGGGGGTGACAACAATTTTTTTGGTTGCTGTTGCTGACGAGGATTCAACCCAGGGCGTGTGTGCTAAGCGAGCACTCCACCACTAAGCTACACCCCTCCTGCCCAGAGAAATGTTAATCCTCCATGTATAAATCTCTGTGAAATGAGAAAATATCTGACTCCCTCTCTCCCTCTGTATTATGGACTCCACACTTCAGCTCTGTAGCTGTTTGCTAATCTGCAAGGGGTGGGGGAAGTTCCCTTTAACTAAATGTCAGTGATTAGAATTTTAAGGAATTTTAAATTGCTGAGAAGGTCCCAGACAGTTGGTGACTCCCTGGTGAACTGAAAACCTTGCTGGCTGCTGGCAGGAGTATACACAGAGGCTGAATTTTATCTTAGCTCCTATGGAAAACTAAAGAAGCCACAGCTCCTGTGAGTGTTCACAACAACAAAGACAGGATGAGGTGTCTTTGGCTCCTAACAGGAGTGTCTATGAATTCCTCAAGGAATTCCAGGCCCGGTAGATCCAGCTGGCAGGAGGTATCGATCTCCACTTCAATTCACTGAATAAATAATGGTTGCCATAGTTATTGAGCAGCCGCCACTGGCTGGAGAGCAGAGAAAACTCCATGCTCCCTTCTGTGAGTTTGGCCAAGAGAAAGTCTAGCTCTAAGGTTCCACAATCAATTGACAGCCCCGCCCCCAACCACCACATCACACCCGACAAATTGCTCAGTTTCTTCATCCTGATAATGAGCATGGAATCTTGGATGTTCTGTGAGACAGGAGGCCCTGGAAGGATGGAAGGACCTCAGTTAATGGACTGGCATTTGATTGTGAGAGACACCTCCTCTTCCCAGCTTGTAAATCAGATTTAATGTGTCTCAATGCTAATAGAATTAAATATCGGCAAGTTGGTGTTTGGTTGTGTTGTCCATATGACAGGATTTTATGAAGGGCCATCTCTTATCTTGTACTGTTTTAACAGTATTCTCCAAATAGCACTAACCCAGACATTTTAAGAGAAAGGTAAAAGAGCCATTCAGTTATTTCACAAATATTTTCATCCTTTTTGTGAAGAAAATAAAATACACTTCTTTATAGTATGTGTATGTGTGCGTTTGTACACATTCCACAGTGCAATTCTGGAGGTCAAAGAGGACAGACAGCATGGGGGAATCCATTTTTCTTCTTCTTCTTCCGTGTAGAGACCAGGGACTAAACTCAGATCATCAGGCCAGGCAGCAAATACCCTTACCTGAACAGTCATCTCACCAGCCATAGATTTGTATTATTATTTTTGCATAGACGAGATAATAGCCTGGGAGCTGTTTAAAACTCTCTTCTTCATTTAATGTTACTGGTATTTTTCCATATTGTTTAATACTCTTCATACTTATCTCTGATAGCTTCAGGATCTTCCACTGTCTTGGCTTGCTGTTATTCATTGAACAGTACCCCATTTTTTCAACTTTGCCCCTCTTCCCAGTGCTTGCTTTGTTTGAGTTCTTGTGTGTGAGGTGGTAACAGATAAATGTTGTACCCAATGTTTCCATACATATGGGGTTGCTGTTTTTGTTTTCTTGACTTTCTTCTTTGGATAAATTCCCAGGAATTGTGGTAGCTTGGTCAGAGGCTATGGACATTTTTATACCTCTTGAGTTTACTGCCAAACTTGCCACCTGGTTCTGTGCTTTGGGGAGAACACTATAAACTTTCGGCAGCTCACCACTGCAAGCAGGATTCCCTCTCAGCCTTCAGCACGGGGGCTCTGCATTTAGCAAACCAAGTGGGGAGGTCTGAACCTGGCTAACCAGCTTATAGTTTCCTAGTGCAAGCAAAGGGAAGAGCTGCAAGGCTTGGGGACACTGAGGCTCTGTTTCTGTTTAGTCTTGCAGCTGCCTCCTGGTCACCAAGTGTCAGCCACTGTCTCAGGTGCTGACTCTCCTGGTGGGTGGTGCTCTACAGTTGGTATAGGTAATATCATCTCAGTTTGAGGACATTTACCTAAAAATCACACTTTTCTGACAATTCACTGTCCGATGTTTAAGTTGAACAAGAAGAATAGGACTAAGACTTGTGTGTTCCCTCCCTCGTAGGAAGACATTGAGTATTGTAGAGACTGGGTCCCAGGCAGAGAGCAGAGCCAGAATTGGATTCAATTCCAAACCCGGGGTTTCTTTCTCTATAAAACACTTCATTACACCAGAAACCTGCAAGCCATAATTCACCGAGATACTGGGGGCAGTGATGGACTTAAATACATCTTAACTCTGGAAGGGTCGTTAGGAGCCCTTAAATCCAGCCTCCTCTCTTAAGGCCCTCGTGAAGAAAGCACTTATCCCAAGTCATATCCACTGACCACACTGTGAGAATGCAGGTATCCTGCTTTTCAGGCCCTTTTTATTTGGGACAAGAAAGAAAATTGTATTGGTAGTTGTTTTCTTTAGCTTTTGCTTCAGAGAAATGACTTTTCTTTTTTTTTTTTAAAAAAAAAACATTTCTAGCACCTTTTTTAAAAAAAATTTATTTATTTTTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGTCGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCTGTTGAGCCATCTCACCAGCCCCAAGAAATGACTTTTCTAACAAGACCTATGACTAAAACAACTAAATCTAGGAGAGGTTAGAAGTTAAGGCTAGATCACTGTTTAGAAAGATATCTTCTACCCCTCAAAAAGTGGAGTTTTATATAAGGATCAGATTGAGGAAGACACCAAGATCAATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACGAGCACACATGAGCACACGAGCACATACACACACATGAATAAATATGGGTTTTAGATATAAATCTAACAATAGAAGAAAATTAGGAATAAAGGATACCCCAGTCTTCCCTTAGAAAAGAGGTTCTACTTTACAGCAGCTGTAAAAGTCTCTTGTATGGGATGTCAGGCTCCTGTGTCATAGCAAGACCCAACATTGTTTTCTAGCCAGAGAACAATTCTTCCTAGAAGATGGGCTTCAAATGCCAGCTTTCTGCAACTGTATGATGGGAACCCTTTTCTGTATAGTTTTGTGGAATTAAGAGATACTCTCCATGTCTTAATAAATGCCTGCCCCATGTCCTCCCAGGCCTCTCTCTCTCTCTCTGCTGTGACTTTTCCTTCTCTGCCTGAGAGGACTTGTGTGTTTTGTAGAGTTCAAGGCATAGGTCAAAACACAGGAAGGAGAGGTGGCCTTTCTTGGCACTGGCTAGCATGGAGCCATGGGAACGCACTTAGGACCAGGAGCTAAGAGGCTCACATCAGTGATTTCCACCCCAGTTTGGGACAGAAACATTAATTCACTTTCCTGTATCAAGCCAAGTGGGCAAGGCTAGCTATCCAGCACTGGATTCTCCTGCTTCTGCCTCCCCATAGCTAGAATTACAAACATGTGCCACCATATCTGGTGGGTTCTGGGGAATTAAAAGCAGGCCCTGACTGAGTTTCTAACTGAGCTATCACTCCAGTCCACAAAGGCCCATCCGGCTGTAAAATGCCTAAACCTGGCTGACGGAAAAGGAGAGAGACCTTAATTAGGACATCTAGTGCCTTTGACCTGCTCCCAAACTTACCAACTTCTCTCTGTCCTTCTACAG
Seq C2 exon
AGCGACATGGGTTAAAAGAACCAAAGAGAGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGCTCTGGAGCCCTCGGAGCCTAAGGTCCTGCGCGCGCTGGTAGAACTGAGAAAGATCTGTACCCAGGGCCTCCAGCGCATCTTCTACCTGAAGCTAGAGGACTTGGTACCTCCACCTTCTGTCATCGACAAGCTCTTCCTTGACACCCTGCCTTTCTGAGCAGGGGAAGCCTGAGCAGAGAGCTACTTGCTCTGCTGGCACCTGATCATTAAGTGAGCAAAAGAATGGGTTTGAACACCTTCCACACTCACTGTCCTTCCTTCAGGGGAAAAGCAGCTCCCGTAGAAAGCAAAGACTTTTTTTTCTTTTCCTGGCACCTTTCCTTACAACCTAAAGCCAGAAACCTTGCAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGGGAGGGGGTAAATAGTTCATGAGGCTTTTCTAAGAAATTGCTGACAAAGCACTTTTGGATGATGCTATCCCAGCAGTGGGGTGGGGAGAAAGGATAATATAACTGTTTTGTTTTTGTTTTTGTTTTTGTTTTTAAAAAAAAACTCTTTCTGGGGAATATGATTATGGTTGCTTTGTATTTAAAAATAAGAACAGCCAAGGGCTGTTCACCAGGGTAGGGCTGTGTCCTACGACGGATCCCTTTAGGATATACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTTTCTTCATTTCTTTCTTAAAAAAATGGCAAAAGATGAAAGATTATCTACAAATCAGACTTAGCAAAAATGATAATGGCTATTTGCTTCCATATACAAGTGCAATTTTTTAGAGTGCTGTCTTACTAAGTCTTGTTTGTGAACTCCCCCTTATTTTACATGAAAATAAGAAGGAGGCAGTCATGCTATGAAATGGCGCGCTCATTTTCCTAGCTAAGGCTTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCGATGGAATTCGACCCCTGATGACTATCCAGCCATCCTGAAGGGGGATCGGGTTATAAAGTGGATTGCATACAACTGTCTTCGCTGTGTTTTGTCAACCTGGACAGAGTTCTCTAAACCTACTTCAGTTGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTCAATCAAGTGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAACACCAGAGATGATAAGGATATATATATATATATATATATATATATATATATATATATGTATATGTATATATATATACATATTAATTTTTGTTATTGGTTAGAGACAATTTTGGAAAGCAAGAGAATCATCTTTTTTTAAAAAAGAGAGAAGAAGAAGAAGAAAAGATAGTATTAACGTGAGTTCTAGAGAAGGTTAGTGGGTTGCGGTTCAAAATTCCGTGTTTGTGCCCCCTTTTATATGTTTCTACTGTTGATGCCATATTATTATGAAATGATTTGTTGCATAGTGTCCTTATTTGTATGAACATTTGTATGCACGTTATATTGTAATAGCTTTGCCTGTATTTATTGCAAGACCACCAGCTCCTGGAGGCTGAGATACAGAGTAATCAAATGGGGTGTTCGTGGTGACTTGGATACACCAATTAGAAATTAAATAAGCATATATATATATAAACATAGCCGGTTACATATATATTTATAATGTGTCTTTTTATTAACCATTTGTACAAGAAATGTCACTTCCCACGCAGTTACTTTACCCTTCACTTGCAGTGACCTTTAAGGCAGCACTGTTTAGCACTTTGATATGAAATTTTTGCTTATGTTTTGCTAAATTCTAATAATGTTTGAAGATTTTAAGGTCTAAAAGTCTTTATATTATATACTCTGTATCAAGTCAAGATCCCTTTGGCCGTTTTGCTAAGACTCAAAAACTTTGAATGTCAAACTGATGTCACAGTAGCTTTTGTTAGCTTTTAATCATTTTTGCTTTAGTTTTTTTTTTAAAAAAAATAACAAACTATACTGTTTATATTGTCATTAAATTATACAATCAAACAAATGCCAAATGAATTGCCTAATTGCTGCAAAGTGTAACCCAGATAACAAATCATATTCTCTCCTCTTTTTGCAACTCATTCAGATGTTTGATCTTGTGTTTTGTTTGTATAAAGATTGTATGAACTATATCACCTTCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGGAAGGGGCCTGGCTCATCATCTGGTCAGATCTATTAAAATTCACAAAGGAGAAAAGTGGGGGCCCGTTGCAGGGCAAACAGCTAGCAACAGGATAAAGGCTCAGACTTAATTCACCTTCCCTTAGTCTCCCCCACATCTTACTGCATCTGTAGGAAAATAAACTTTTAAACATAGTCACGCATACTAACACTTTACCAGCAGACAGCCTTGAATAAAGTAGTACTTTGGCATTAATTTGTTGAGCTTATATGCAAACATAATAAACATTATTAAATATCAGGAAAGCTAACATTTCACACGAGATCGCTTCAGACCAAATTCAATTTGAATTTGAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGGTTGTTGGTTTTTTTTGTTGTTTCTTTTCGTCCTGTCTGAAAGGCAAAGCAAAACAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGATTGAAGGGAAAGAACTGTCTAAGCATCTATCTGCTGGTTTGAAGAATGATGAAGCCGTTTTAGTTAAGGGCCAGACACTAGTGCTGAAAGAAAAGACTATACAGCCAGTGTTCTTCTGTCTTCCATAGTTATCACAACTATGAGAGCCTCTTAGGTCATCATTTTGAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAGGACAAGCATTAATGCAGGTGATTCCTCCCGCTGACTGGAGTGCAGTCTCAGTGTGAACCCGCCCTCAGCAGGAAATGGGAATCCACTTGCTGTTCCTGGAGAGTGCCTTGCTTTTGTTTCAAATGGCCGAGTCTCCCAAGCCCTTCTCCTCTAACAGCATTGCTTTTTAGTAAGTGTGTGTTAACCTGTGGTTTGAAAGAAATGCTCTTGTACATTAACAATGTAAATTTAAATGATTAAATTAAATTACATTTTACCAATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000028341:ENSMUST00000030025:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.037
Domain overlap (PFAM):
C1:
PF0010425=Hormone_recep=FE(31.9=100)
A:
NA
C2:
PF0010425=Hormone_recep=PD(34.6=78.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types