GgaEX1031922 @ galGal3
Exon Skipping
Gene
ENSGALG00000009283 | KIAA1715
Description
NA
Coordinates
chr7:17485427-17489739:+
Coord C1 exon
chr7:17485427-17485468
Coord A exon
chr7:17486638-17486825
Coord C2 exon
chr7:17489681-17489739
Length
188 bp
Sequences
Splice sites
3' ss Seq
TTGAACCTATTTATTTACAGGAA
3' ss Score
9.15
5' ss Seq
GATGTAAGT
5' ss Score
9.11
Exon sequences
Seq C1 exon
GCAAAGCCTTCTACTGTAGAAGTATTAGAAAAAATTGATAAG
Seq A exon
GAAATACAGACCTTAGAAGAATTTAGAGAAAAAAATCAGAGACTTCAGAAACTATGGGTTGGAAGGCTACTCTTCTACTCTTCACTTCTTTATCTTGCCACCTGCTTAATTGTATATTTGTGGTGTCTTCCTGATGAATGGACAGCAAGGTTTTTTATGACACTTCCATTTTTTGCATTTCCACTGAT
Seq C2 exon
AATCTGGTTTATAAGAACACTGCTCATTTTTTTCTTTTCCAAGAGGACAGAAAGGAATA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000009283-'3-5,'3-3,4-5=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]