GgaINT0125612 @ galGal3
Intron Retention
Gene
ENSGALG00000005095 | F1NYW3_CHICK
Description
NA
Coordinates
chr17:5436875-5454730:-
Coord C1 exon
chr17:5454464-5454730
Coord A exon
chr17:5437002-5454463
Coord C2 exon
chr17:5436875-5437001
Length
17462 bp
Sequences
Splice sites
5' ss Seq
CTGGTGAGC
5' ss Score
8.05
3' ss Seq
TTTGATTGTCCCCTGAACAGAAA
3' ss Score
6.67
Exon sequences
Seq C1 exon
GCGCGGCGATCGTTGGCCTCCCCGGTGGTGAGCGGCGTGCTGTGCCCCTGCGGCTCCCCGCGGGCCGCCGCCGCGCCCGGGACCGGCGCTGAAGGGAGTGGCGGCGGCCCCTGCGGAAGGGCGGTGTGCGAGGCCTCCGAGCAGGACCGGCGGCTCCGCGCCCTGTTCCAGAAGCTGGACGTGAACCGCGACGGCGCGCTCTGCATCCACGACCTGGCCGTGGGGCTGGGCCGCCTCGGGCTGCACCGCACCGAGCTGGACCTGCTG
Seq A exon
GTGAGCGGCGGCGCCGGGGCTGATTACGCCGAACGCGGCGGGCTGCTTACGCTGCCCCCGGGCCTCGGCTGGGGCTTCTGAGGGCGGAGGGCGATCGGCACCGCGGGTTCTGCGGTGCGTTCTGCCTCACCCGGGGAGGGCTGGGAGCGTTGGTGCCGTGCGGTGCTGCGCGCAGAGGGTGCCGGGCTTCGGGGCTCCGTGGCGTTGTAACCGTTTAGAGCCGTGTGAGTCAGCGCTGTGCCTGCCCTCGTGTACAGCTTGTTGCTCTGCCTTGGGTGCAGGGCCGTGCAAAAGCCGAGTGCTGCGGGACGGCAGCAGTCAGTACACGTGGCTGCAGCCGGGGTTTGGCACTGCACAGCACATCCTTCCTGCGGGGGGGTGGAGGGGATTTCTGAGTCCCTGAGAGCTGACCCAAATGACAGCTGTCACTGCTCCCAGAACCGGGAGAGAGTGCCCCGTTTCAGCCCCTTTGTATGCATCCATCCATCCCGAAGTCGCTGCTGCCTTTCTAACTTTGACTCTCCAAAGCCTTGCTTTCTAATAGTGCGTTCTGGTTGGCATCTTCCTTGGGAACGCTCTGGCAGTGTGAGCCTCGTGTGAGTGGTTCTGTTGTGCTGCTTCTAAAAATAACATCAGTGCCATGGTGATTTTCTACAGCGTGCACTTTGGTAACGGAACCTGACTGCGCCCCATCAATCACCTCTGTGTGCCATGTGAGATGCTGACCCGCTGCCACCCACGGGTGCCCGATCCCTTAGCTCTGGCAGCAGGCTCTCACCTGCTAGAACATCCTGTGCTGATGCCCACCCATCTCAGCTGGCATTCCCTCTTCATTCTGAGCCTGTTATCCAACACAGCCTGATGCTTTCCAGGATGCTCTGTGAAACAAAATGCTTTCTTGCTTTCCAGCAGAGCTGCTCTGCTTGCCATGTTGCAGGAGCAGCAGAGAGGAAGCGTTCTGCAGCGTCTGGATCTGCTCTGTGCAGGGGGGAAGCACTGTGGATGGCTGTGCTGCTGCTGCGAGCCCTCAGCCATTGGGATTGTTCCTCAGCCCTTTGCTTCTTCTGCTCACTGTTGAGCTGTGCAGGAAGCAGCTGGTTGGATAAAGGGAGCTGGCGGGGCACTGGTGGTATTGCAGGGTCCCCTTCAGCAGTGTGACAATTAGCATCTGTGAAGAATGAGGATGCAGAGTTCAGAACTCCAGTTTCATTTGTGAGAGCAGCCCTTGGAGAGCTGGCTGGAAAACCTCCGCCTTGTGTCATCCTTTAGGGAAGATTGAATAAACTTCCTGTTTCCCAGAGAGTTCTATTAATAAAAGCATTCTTTTTTCCTTCCCTGTCCTTAGCCAATAATGACACTCAGACATGTGGGCTAAGCACTGTGAAGTCACATTCAAGAAAAGCGTTTAAGGGTCAGGATAAAGACGCAATGTTTGGAGGCCAAGTTAAGCATAAATCACATGGGTAGTGAATAGTGAATCACTCTGTGGCTCAGGTACCTTGCACCTTTTCTTTCTGTGCCACACTGCAGTGCGTGGGATGTGGGTGCAACCCTCCTGCCTTGTAATGCCACGCTGTCCGCCAGCTTTACTGGTGTCGGTTGGCCAAAAGTCCTTGTGGCAACTGATTGTTTTGGGCTGCAGCTTGAAGGGAAAACGAGCCTTGTTATGGCTCCTTCCGAACCTGAGAGTTCTCACTGAGATAAAGCCCTCTGCAGCACTCCCAACATCGCTGCCTCCCGCTGCAGGGGCGGCCTTCAGCACAGGCAGAGCAGGCAGCGGTACATCCATCCATGCCTTCTGAGGTGGAATTTGCTAACGTCATCAGTGGGGTTTTTTTAAATTCCTGCTGTTATCTTGAAGCCCTTTGACAAACACAGGATGCCAGAGCGGTGAGCCTTCCAGAGAAATGCTTGTTTGAGCTGGTTGCACAGAGCAATTCGCATACCTCACTTTGCTTGAGCAGTAAAGTGATAACCATGTGAATAACACTTTACGGGCTTCCTTGTCCTACTGCATAAAGGGACATTCTGCTGCTAAATTACATCTGCCTCTGGAGCAGCTGAGCTCTTTTTACTATTTCCTAAGTTGTCCTGAAGATATTTGTGTAGATTTATAGAACTGAAGTATGTGCTTAATGGAAATGAGGGTCGTTGAACCAGAACTGTTCTCTACTTTTTATCTGGAGATATACATGTGATGTAGCTGAAGGCTGTGTGATCGTAGCATTTGTGCTCATGTGGTTGTTTTCCTGCTGACCCTGACCTGAAGTGCTGTCTGGATCTTCTCTGCTGCTGCGGGCAGGGCAGCTCTGCCCTGCTGCAATTCATCGCTGCTGCATAGAGACAGCAGAGGCTCTCTATGGTTCGTGGAGCTGAACCTCTTTTGGGGGGCTAACTCTGAGTTAAGAAACAGAGCAAACATAACCCTTGTTTCTTTGCGGCCGTAACGGTCTGTGTACCTTTGCTGTAACCGGGATCTCCTCCTTGACCTTGAGATGCTGTTGTCTCTTGGATCCATGCACGTGGCTGCCCATTGCTGCCTGGGTGTCAGCTCCCCATCGCACTGCTGAAGTCTTTGCACAGGCTTTCATCAGCATATTCTTTGCCTATTATCTCCTCTGCAATCTCAAAGCTCTGTCCACTCAAGTTCTGTTTTCACCTGTACTGAAGGAGCATAACCATGCTGCTGCAAAGCTCGCTTGGCTCTGGGCTTCTCTGAGCAGCTTTGTTTTTTGGGATGGCTCTTGGGCTGTTCCAGCTGCTGGGGAGCACCGTGCCCTCCTGGCCCCTGCTCACTTAGCTCTGTTGCAAGTGATTCTGTGACAGATGGGCTGAGAAGTACCCGTCAAGATTGTAACTGATAAGACACAAAGATTCAATCTTATTTCTTCACTTTATTTTTTCATTTAGACTCTTTTATTTCTGTAACTGTTCTACTCTCTGAGCTTTCGACTGCTCTTTACTGTGCATAACGTGCTGTAATTCTGAGCAACTGTAAGGCAGGGAGCCCTTCCTGTGCAGCACTTTCACCTCATTCCTACTGTCAGTCATCTGGAAATAGGTGACCTGAATCCCTATTGAGTCACAACACCCTGCTTGTGATTAAAAAGGAGCAAAACTGTTCTGTAATCTAGACCAAACTATCTCTCTGAAGCCATATACATTGAAACGAGGCACAAAACGTAAAGATGTGCTGGATCCTGCTGGGGCAGTTGGAGGCTTGTAGCCAGGCCCTTGTAATTAATTGCTAAGGGTTGAGCAATATGAGGTCACAATCAAACAAATGGAGCAGTGTTACAGTCTGAAATTCCAGCTGATCGCCTTCCTGCTGCTGAAAGGTATTTGCCAACAGCTCCCCAACCACCCATCTTCTGCTGGCTGATCCCGGGGGACTGAGTTGGACATCATGAGCAGTGTGCAGGCAGTTCCACCTTGCGTTACAACACGTTAAATAGCTTCAGATGTGTGTGGGTAACGTCCCTTAGAACAGGGAGCAGGGAAGATGACGTTTGTTCGCTGCTCCGCAGGGAGCCGGGGCCTGTTGCTCCTTGCAAGTTATGAAATGTGTGGTTTGAGAGCCTTGTTTCCACGTGTCTGCGAAATGTGCTGCAAGAGCAAAACCGTGGCTCAACGATTTCACTGTAGATAAAGCCTTCAAATCTGTGGCAGGCACGGGAGTTGGTGTGCGTTCAGTGATTTAGATGCGCTGAAGGCACGGATGCATGCTTTGTAATCCAGCAAATGAGTCCCTGGCAGGTGCTGCGGGGCCCTGGGAGTGGTGTAGGGCAGGCTGCTGCCTGTGTGACTGATGTCTGCTCACCAGGCATCGCAGTGCATTCCACTGAGAAAGGCTGGAAGTGAGCTTTGGGTGTAGACGTATGCAAGGGGAACTCGCTCTTGCTGCGCCATTGCTCATTTCTATGCATGTAAACCTCAGCTGTAGCAATATGGTTGTATACCTGCAGGACAGATGTGCAGCCCCTGAGAGGTGTGACCCAGCAGTGCCCTTCCTGCATAGTGCTTTGCCTACCTGGCAGCTCGTGGGTTTCTTTAGCTGGGACCTTTACCCCAGTTATGGCCGATAAGGGCTGCAGGATGATGCAGGCACAGCTTGGGCTTGAGCACACTGCTGGTTAGCACTGGTGTGGTGAGCTGCAGCCTTGCAGAAACACAGGGCTGTGTTCTGCATGTGCTGTGTGCTCCCAGACCCCCTGACCCTGCCTGGGCAGCAGCTTTGGCCTTTTGGCATGTGTTCTGAGGGGTGATATTTAACTACCAGGGCTGAATTCCTTGGGAAGTATAATGCAAAATGTCTCCTATGGATCTGGGCATTGACCATGGGTCAGCTCAGGGAGGGGGAAAAATGAAGTACTGAGAGATAAGAGCAGGTGAAAAACGCTGAGCTGCAGAGTGATGAGTGGGAGTTGGTTAAGAAACAAAGGCCAGTGACAATTCTGGCTGAATACGGAGCTAAATACTTGAGTGGTTGACACATGCCCCATCCCTGCAGGCATTCAAGGCCAGGCTGGATGTGGCTCTGGGCAGCCTGGTCTGCTGGTTGGCGACCCTGCACATAGCAGGGGGTTGGAACTGGATGAGCACTGTGGGCCTTTTCAACCCAGGCCATTCTACAATTCTGTGTTCATGAAATAACATCAGAACTGCTATAAGCTTGCCTTGCTCACAAGCCCTACAAGATGGGGAGCGCTGCAGTTCTGTGCCTATATTGTGGTGTGGTACTGGCAGGGGGAGGTGGGGGAGGGACCGTTGCCACAAGTAGGTCTGAAAGAAAAATGGTAAATGAGTCTTTGTTCTTGTTCATGTCCTATGGCTATATTTGTCCCTCTGAATGTGGGACATGAGCATGCTTTAATGACGCCCCAGACTTTGTCTGGAGTGAAGAAAGCAGATGCATCACTACTATAGGACAGCACCGGAGGTGCCTTCGTTCTGCATTCCACACGGTGAGCTGAGGCTCCGGGCAGGAGAACTGTGCTTTAAGAGAAATTGCTGAGATTGTTGGATCGTGAGATGCTGGAAAGGCGAAGCCGTTTGGTATGCGAGGCCGCATTGTGCAGAGAGCCCAGGCTGGGGGGATCATTTCCCAACAGCCACTTTCCTGTTACTTTGGTACATGCGCTCGTTCCTTTCTGATTTAGGGGGTTTATAGATGCCTCTTGCATCTTACAATTTCTCTTGGTCAGTGCTCAGCCTTCGTGTGATGAAACCCAGCGATTGGCATCTGCTTGGCGCTGCCCCATTGCCTGGTACATGGGCTGGGGCAGCTGGTGGCTGTGCCGGGGTTCCTGCAGAGAAGTGGCCGGGTTTTGTTGCAGCACTCTGTTGTGTCACCTCAATAAATTAACGTGGCTGAATGTCACCAGACAGCTTAATTATTTAAGCAGCAGTGGCCAAGATGGTTGGCAGCGCGCTGTAAGAACCCTGCACGGCGTTTCTGGATTTCATTTCAGCTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAGTGGAAAATCCTTACATTAAGTCTTGTCTTTCAGCAGTGACGTTTGGAAAGATGAGAACTGGGTGTAGGTGGCCAACCTCGGGTGCCCCACGCGCCGCAGCCCCTGCTCGGGTGTCCTGGCAGCTCCTCCTGCCTGACTCACTGTTGGGGTCACACCAGGATCCCAGGAGGCCACTGCTGCGGCAGCTCTCCTGCACTGGGGGACAGGGATCGCTGCTCCCTTCCCTCTGCCCCTTCCTCTCCACCCTCCCTCCTGCATTTTTTAAGTGTGAGCTAGTTGTCTGCTCGGATTCTTGCTGGAAAACGCCGTGTGTTTGCTCATAGAATCATAGAATCGCTAAGGTTGGCAAAGACCCACAGGACCATCCAGTCCAACCATTCGCCCTTCACCAACGGTTCTCACTAAACCACGTCCCTCAACACAACATCCAAACGCTCTTTGAACACCACCAGGCTCGGTGACTCCACCACCTCTCTGGGCAGCCCATTCCAGTGCCTGACCACCCTTTCAGAGAAGTAGTATTTCCTAACGTCCAGCCTGAATCTTCCCTGGCGCAGCTTGAAGCCATTCTCTCTAGTCCTATCACTGTCACCCGAGAGAAGAGGCTGACCCCCAGCTCACTACAACCTCCCTTCAGGTAGTTATAGAGAGCAATAAGGTCTCCCCTGAGCCTCCTCTTCTCCAGACTGAACAACCCCAGCTCCTTCAGCCGCTCCTCATAAGGTCTGTGCTCCAGAGCCCTCACCAGCTTTGTTGCCCTCCTCTGGACACGCTCCAGGGCCTCGATGTCTTTCTTACAGTGAGGGACCCAAAACTGGGCACAGTACTCGAGGTGCGGCCTCACCAGTGCTGAGTACAGGGGGATAATTACCTCCCTGTTTCTGCTGGCCACACTATTTCTGATACAAGCCAGGATGCCATTGGCCTTCTTGGCCACCTGGGCACACTGCTGGCTCATATTCAGTCTGGCGTCAATCAACACCCCCAGGTCCATTTCCTCTACACAGTCTTCCAGCCACTCTGCCCCAAGCCTGTAGCGTTGCCTGGGGTTATTGCAGCCAAAGTGCAGGACCCGGCATTTGGTCTTGTTGAATCCCATCCCATTGGCTTCAGCCCAGCTATCCACCCTATCCAGATCAATTAGAATTCTTCCAAGGGCCATCTGAAAGCAAGCATGAGATGGGTTCTGCCTGGTGCCACCAGCACGAGGAGCACAGTGCCTGCCCCAGAGCCGAGGTGTGGCTGGGCTGCAGGATAGGGTCAAAGAGCACACAAAGTACCTTGGTTTTGCTACTTGAAGAGACCTCCCTTTGCCAGCTTGCAGTACAAGGAAAATACTGCTTCAATTAAGCACGCATCATTCTCTTGCTCTTTCCTTTCTCCTTTGTCTCCATCTGGATGGATTGCATGGCTTCATTGCCATCTTCTCCTCTGGTTACCTAAGGATGGCCCACCTTGGTGGTGCTGGGCATGGGGTTGCTGCCTTGGGCACCTGCTGCCTGCAGCCACCCGCAGGGCACTCCTGCTGCTTTCCCCTCTTAAACATCTTTTTGGTTCATGGAAACAGCTGAAGAACTGTTCCAGAAGAACGAGAGAGGTGGGTTGGGCAAGGTGTTCTCGTATGACCTGGGCTCGTGATTTCTAGATCAAATGAGTGTCTGTTCCTCATCTGTTCCCCTGCACTGGTTCAGGCTGGACCCGGACCCACTGAGTTTGTTGCATCCTTTGTGTGTGAGCGGTTGGCTGCTGGTGGCGTCAGTGGGGCAACACTTGTGTCCCAGCTCCCTGCAGGGAGCAGCTGCTTTGCCTCCGGCTATCATCATCTCTCCATTACTCGCTTTATTGTTCTGACCTAATAAAATTCCTCACTTGGTAAAATAAATGCTTTTTTTTTTTCCCTCTTTTCTAAATATGATTAGAAAAGGCTGTGTTCCCAAGGAGCCCTGTGGATTAGCACGGTGGAAGAATTCCTCTGAGGTTTCCTTCAGCAAGGACGAAGGCTGAGGAAGTGCTGCTGTGTTTCTGCTGTAATTGCACCCTGGGCATGTATTTTCTTGCACAAATTACTATTTTACCATGCAAACTCTGCATGAGCAAAGGAAGATGGGGTCTGTGCCATGTGTACACCCCAAACATAAGCATATACAACACAGAGAAACTCAGTGGTTGTGTCCCATAGCGTTAGTTGCTCTCACAGGTCCCTGTGTAGCAGCCCAGCACTGTGATCCCAAGTCCCACTCATCTGCTTTGCTTTCATGTCTTCACATCTGTGCTTGCTGTGGGTCTATGGGATGAGCTCCTGGAGCATCAGTGTCAGAGCAGCTTGCAGCTTCTTGGCAGTCTGTAGCCCTAGGCTACCGAAAGCTCATTTTGATGAACTGTACCAGTGCAGGAAATCTGCTTCATTCCTCCTTTTGGCTCAACAGCATTAGAAGCTTTAAAAGATCACCTTAAAGCATCGCAATGGCAGTGTGTTAGAAAGCAGTGTGACTCCGGTGGGGGTGGGGGCATGGCACAGACCAGAGCGGGGCTGTAGACTTTTATATTTAAACAGCATTTTTTTCCCATTAAGTAATGCTGAAGCGTATTTGCAGAAGAATTCTTTCTTTTATGTGAAGTCTTCTGTGTGCTCGTCTCTTTTTCCATTACTCAGGTTGGTGAAAGGAATTCGGCACTAACAAGTTCCTGTAAGTGTGACGCCGAGTGTTCTCCCTTAAAAACCGGCTGCCTGCAGCTTGGAGTTCTTCCAGCTTGGCCATGTTATTTCCATATCTAAGAGCTGTAAGGCACAGGTTCCCTATGAGCTGCTGTCAAAGGTTAAGAACTGGAAGCAGTGGTCCGGCAGAGGCTGAGGAGCTCACTGCCGGCACGGAGCCTCAGGGATGGAGCTTTGCTCTGTGCTGCTGCACTGTGCTGGAGCCCAACAGGAGGGTGGCGGTGCTGTGGGGGTGCGCTGTGTGATGCCTCCTCCTGCAGGTGTGGGGACGAGTAAAGCTCTCGGGCTGCAGAGGAAACTTGAAGCACAGAATGGCTCGGGTTGGAAGGGACCTTAAAGATCATTCAGTTCTGACCCTCTGCGGCACGGAAGGGCTGCCAGCCTCTAAATCAGGGACCAGCTCATGTTGCACAGGGCTCCATCCAGCCTGGCCTGGGCACCTCCAGGGATGGGGCAGCCACAGCTCTGGGCAGCAGTGCCATTACCTCCCTGCCCTCTGGCTTTAGAATTTCCCCATAATATCTAAAGTTCCATTCTTTTAGTTTAAAACCACCTCCCCCTCGTCCTATTACTGCCTGCCCATGTAAAAAGTTGACTTCTCTCCTGTTTATCCGCTCCCTTCAAGTACTGGAAGGCCGCAGTGAAGTCTCCTCAGAGCCTTCTCTTCTCCGGGCCGAACACCCCCAGCTCCTCAGCTCGTTCCCATAGCAGAGGAGCTGCCGTGGCGCTGGGTACTGATGTATGCATGTGCTGCTCTGGCTCCGTGCAGCTCTGCTAATCCGGCGCTGAAGGTGCAGCGCAGCTCTGGCCCGTTGGGCCGATGGGCGATAGTTAACCACAGCCTATCGGCCCTTGCGCAGATGAATGGGCGTAAATGCTGTGCAAGCGCGTCGCTCTGAAAGCCAAATGGCAGAAGCATAATGCAACACCAAAGAGCTATTGTAGTGGCGGATGAGACTATAATAGACCGGAGAGAGAGGGTGCAGCTCGAGGTTAATTCAGCCGCGGCCAGGAAAAGCGGTCATCCCCGCAGAGAACCATCTGCTGCCCGAACAAAGCCCCACCGCGGAGCCCCGCGAGCGGCGGCTATGTGAGCGGTCGGACCGGCCCTGAGCCGCACCGGGGCCGCAGCCCTCCACCCTCCGGCGCGCTCCCCCGCGGTGCCGGCGCGCTCCCGGCTGCGCGCTGCTCGCCCCGGAGCCCCGCGGCGCTGGGAGCGGCGATTGGCTGCGCGCTGCTGCAGTGGGGCACAGCCCGGCGCTCGGCCCCGTGTGCTGCCGGGACCCGCCGGGTCGCTGGCAGCGCTGGGAAGCGCCCGGTTTGAGCTTTCCTCATTTCGCCGTTTTCTATCCTAGCGTTCTCCAAAGCTCCGCTCCTTGGCGTACCGGAGGGCTGGCGCTTTGTCTCTTGCCGTCGGAATTGTGAGGCTCTTGTGCAATGAGCTGCTTGGCAGGCCGGGCACGACTGCAGTAGCAGCAATTTGAAAAGGCAGGAAACGTCTGCGGGAGCGGGGCTGCGCGGAATCCCAGCCCGTGGAGTCGCCGGGTCGGACCCCCCGCTGCCTGCCGTGCCGTTCCCATCCCGGTAGCGCAGCCCGGGCGGCTCCCGGCACGCCGGCTTTGCTCGCCGGAGCAGCGATGCTGCAGAGCCTTTGGCGTTTTCTATCTAGCTTCCTTCCCAGGGCCGCATGCCAAGGTCCTGCTGATGGAAAAGACGATGAGGCCAGAAACGCCACCCCACTGCCAGGCCCCGGGGAGAAAGGGCCAAAGGTGCTGGGGAAGCCACAGGACAGAGGGACTGACCCCACTGAGAGGAGACCAACTATCCTACTGGTAGTTGGACCTGCAGAGCATTTTCCAAAGGTAACGGGATGTGCTGAGGCCGGAGCGCACGGTGTGCGGGAGCGCGGGGCTGCAGGGGAGTGCAGTCGTTGCTGTGTGTGTGTTTTGGGAGGGGGTCAGCAATAGTGAGCGGGGTCCGATGTGTTTGCATGCTGGAAGCAGAGGGACCGAGGGAATGACTGCAAAGAGGTGATGTGACCTTGCAGATGTGCTGTTCTAAGGGGAAAAGATGTTTCTGGGGGGTAAGGAGACTCTATGGGTCTAGAAGATGACTTGCAAGCAGTGTAACTCAGAGGGCTGGCAGCGATAGTGAAGGTTGGTGGTGAGTCCTTGAGCCGCACCAGAGACGAGCAGAGGATCCAACAGATCCTAAAATCTCCTGGTCAATCCGTGGTCATCTGGCACTCCCCACGACTCCATCAGGAGCTCGTGTGTTAGGAGCAAGGGAGTACCTGCCGTACGGCTGGAATGGCACAGCCCGCAGATGGGAATGGCTGTCCCATGGGAGTGAGTGGCATAAGGAAGAGACCTAAATCCGTGTGATGATGGGAACTTCCCGGGGTGGGGACGTGGTGGGTGCGTGCAGTTGGCAGAGGATAACCGGTGAGGCTTTGTCTGGGGGGAGGTGAACAAAAGCAGCTCAGTTCTCTGCTGGCCGTGTAGTACGGTGCTGGCTGACGGCAGCTCCAGGTTATCCTCGGGAGGGAGGGAACGCTGTCCGTGTCTCCTGAGGATGATGCAGTCAGCTGTGACTTCATGAGGGTTGTGAGCAAGGGTGTGAGCTGAGATTATTGGGGAGGGGCTGTGCAATGTCCCCTGTGCAGCTGGGAGGGCTGCAGCACAGAGTGGGGTGGCTGCAGGATGCGGCTGTGGGACTGCTTTCTGAAATAGGGAATGAACAGGGTCAGGTTGCAGGAGGGCTTAATGCCCTTTGCTGATGTTTCGGAGGGAAGCAGCAGGGTGGCATCTCTGTTCTGCAGAGCAGAAGCCACTCCCTGCCTGAATCGGGCTGAAACGTCTGCAGGGACTTCTGCCTTCAGCCCCATTGATAGCAGTTGGCACCGAGCATCTCCTCCAGAACCTGCAGCGTGCACTTAGAGAAGGAGAGGACTTTGTGTGCAGAGGTTGAAGAAGGACAGAGGCTCAGGACTGAAGGAGGCTGTGATGAAGGAGCAGGGCTGCAGATCTCTGTTTCCTTCAGAGGGAACAATGCTCCTTCAGTCCGGGAGAGCCCATCTGTTCGCACCTGCAAATGGAGCTCTCTCTGACACGGGGAGGGAGTTGATACCGATCTCTTGCCTGTATGACCCTGAGAAGCTTTGCTGCATAGGAACCCTAAAATTGGCTAATGCAGAAATAGCTGGGGGATAAGGATGTGATAAAATGGAGTTATTGCGGCTTAGGAAGTAACTGCCCATCTGCTGGGAGGTTGTGGCTGTGTAATTTTAGCCTGCCCTGATTGTGAAGTGAAACACCGAGTAAAGCTCTTCTGCTGAGGATTATGCAGCTCTGGTTTACCTTGCACTGCAGACCAGCTAATGCTGCATGCTGTCGCCGTGGCTCAGCTGACAGCCAGTAACTTGTGAGGCTTGATGATATATCTGTGCTCTGATTGCCTAGCAAGGAGAAGCATTGCAAAAAAGTCCAGAACAGCACAAGGGATAGGTGATAACTCACTGTGTGAGCACCCAATGGTACGTGATGTGTAAGGAGACTGGGGACTCGTGGCTTCTGCTCTGCCCTGGGACGCTGTGACCTTGGGATAAGTGTTAGCTGGGTGCCACGCCGTGCTGTCCGAGCTCCTGTAGGTGTCTGCTGAATCATCCCGAGCACTGCCTGATACTGCAAGCAACGTATGTGTGATAGACCTGGCTGGGGATGCTTCATCCCTGCTTCATCCCAGCCCTTGTGCTCGGGGTGACTCAGCTGTGCTCCTCCTGCAGGTAGCGGTTCCGACACGCGGTAGTTCCCATGAACACAGAAGAAAATGCTGATTGAGAATGTGACGTGTTGGCTCTGGGTGTGTGTGCACAGGACGGGGACGGCCTGGCCCTGATGTCACCACCTGGACTTGTAACTTTGGATCTGTGTGTTGGCACTGCACAGCTCACCTCTCCTGCTCACCTTTACAGCACGTTCTGATGCTGTGGCTCTGCCCTTCCTGTCCGTACCCTTCCCCTCTGTGCTCTGTGCTCCGCTGGGGTCTCTTCAATGATTAACTCCCCTCCTTCCTACGCAAAGGGTGTCTTTGTGATTTGTGACAACCTTCTGTACTGGCCAATTAATTATCAGCTAGCCTCCAGACATGACAAACACCAAGTCAGCAGGACCTGCCGAAACTTCCAGCAGAGGTGCACCTACCCGGCAAGCTGCTCTGCCTCCAGAGGAGGCTGTGAGCTGTGTGGCTGTGACGTGTGCTGGCACTTGGTATTTTTAGAGACACTTCTTTTTTTTTAGCAGAGTAAATTTAAAATTAAACAGCATCCTTGTATGGCTGCATCCTCCCATCTCCGGGAGGTACCTTCTGGAGCTGATGTAGTTCAGCAGCGATGAAGCAGATGCCTTAAAGAGTAGAAATGACTTAGGAAAGGCCAGCGTTGGAACGGCGGGGTGTCGTAACTCGTGCAACACTTAAACGAGAGCCAAATCCTGTGAATAAAAGGGACAGTGAGTTTGCAGGGTCCCTGACAGCAAGAAGAGTGAGTGTCCCATAGAAGGCGTGCGTTTGGCTCTCCCTGCAGCGGGAGGCATTGGTGAGGCTGTGTCCCATCCACCGCCACCCGCAGGTCCTGTGCCTGAGGCTCCGGGGCTGTGCACATGCTGGGCCCTGTCTGGCTTTGGGCACTTCCAGGTTTACCAGGATTATTGTTCTTATTTTTGACGAAACCTACAAACCTGCTAATGCTTTTTTAAATTCCCTTCATCATTATAACCCGAATTGCCAGTATAAACTTCACTTGTAATCCATCTCTCCTTCTTAGCTCCCTCTCCTGTAATTAATACCCCGTGTAAATCAGCTTTCTTAACGTCATTACCTCTCTCCTTTCCTCTGACGTAGGCAATAGGCTTTCTTCCCTAAAATGTGCAGATTCTGCCTTTTGTTCTCGCTGCCAACTGGAGATGGAGTTTATTAGGAAAATCTGCATCATGTTGGCATAGCAACCGAGCTGCCGAGCGGCTCAAATAGTGATGCTTGGCAACTCGTGGGAAGGAGCACGGAGGATCCTGAGGCTCGGTGGGCAAATCTCAGTTATATTTGTTCCTTCAGCACCTGCACGTGGGGCGGGGGGCTGCTCTGGGTGCTGAAGGCATTGATTTTGGCCGTTCCCATCCGTAGCATTGGAGCAGTGGGTGGACGCTGCGGGTTGGCGTGCAGTGAGCTGTTGCAGCTGATCCCTAAGAGGATCTGCAGCCTGAGAAGATCCCATTGCCGTGCGGGGACGTCAGCAGGAGCAGGTTAAGCCCAGTTAGGTAACGCGGTGGCAGGTGAGGTGCCAGAAGGGCATGGGAAGCCTTCACGGGTCACGGCTCCCAGCGGCACCCTGCTGCTGGCACCCCGTTATAGAAAGCCTTAAAATAACCCCTCTGCTTGACCATTCTCACTCCAAGTCGCTGCTGTGCGGCTCCACGAGCAGCCTGTTACAGACCTCAGCCTTCTGAGGTCTGTACGGTATGGTACGGTATCTCCTTTAGTATGCCTAAAGGCCACAACACCCCGCAGGGACACACCGGCCCTGCGCTGAGGTGTGAGGAGGAGCAGCTGCTGGACTTTGTGCTGGTCGGCACTGTTTGAGCAGAGCAAACACGGGGTAACGTTGCAGCGGTGGGGAGAGCAGTCAGCAGGGCTGGCTGGAACCAGTTTGACAGATGAGCTGCGTTACCTCGAGTGCAGACGGGATGGGAGTGTTTGGGAGGCTGGCTAATGGCCGTGTGCTCTTGGGTCTTCCCTGTGTGTAGCTCCGCTGGCAAATAGCAAAGCTTGAGCTTCGTTGTGTGGTTTATGTCAGTGGTTGCAGCTCTGCACCCTTTGGCACTTTCGCCCCAGAGCTGGGTGCTGTCCTGTACATTGAGTTCCACCTGGTGCTCCAAAGCCTGTAATTACCCGAAGTGATGCATGTGCCACGCTCCCTCCTTGGCCAGACTTGTTATCCACGAAGCCTGGAAAGCTGCTTGCAGAGTGATTACATCCACAGTGGCAGGAACTGGAAAAGGTAGATCTGCCCAGGCCACTGTTCTTTGTAGGCCATAACCAACTGCAGTGCTTAACTGCCACTGGGAGAGGAGGAAGGACAGGTGGGGAGCTGCAGCTGCTGTGGAGGCTCGGCTGGGAGCAGCTGGGGCTGTGCTGGGGCTGTGCTGGAGCTGTGCTGGAGCTGTGCTGGAGCCCTGGGCACGGCCCGTTTGGTGGCGATCCTCCCAGCAACACCACTCAGACACGGCACGGTAGCCTCTATGAACGTGGGATTCTAGAGCTTTTCCTTAAGCCGGACATTCCTGGGAATTCAGGTAGGGAAACCCCCCGTGTCTCACGGAGGGAGAGGCAGTGCCCAAAGCCAGGCCCTGCAGGAGGACCTGGGGTGAGGCAGGCAGCAGGCAGGGCCAGCTCCGGGGGCACCGGGAGCGAACTGGGAGCCCAGTGCCAGCGGTGGGAGGCCTCGGTGGGAGGCCTCGTGAGAGGCTGCTGGCAGCCCTCTCCATTGGGGAGGGCCGTGGCTGCTACCGCTTCCCTTTTAAGTAGAAGGGCAGGGCTTGAGCAGCCAATCCCGCCGGAGCCGGGCAGCTCATAGGCAATGTGTCATGAGACACGCCGGCATTTCCTTCCCACCACGCACTGAAATTAACTCCGGCGGTCTCTCGGCGCTGTGTCCTTCCCGGCCTGTCCGAGCAGCGCAGCCGAGCGTGGGGCACAGCAAGATGCTCTGCCTCTGTCTCTATGTGCCGGTGCTGGGGCAGTCGCAGGCAGAGTTTGAGTACTTCGAGTCGAAGGGGCTGCCGGCCGAGCTCAAGTCTATCTTCCGCCTCAGCCTCTTCATCCCCTCCCAGGAGTTCTCCACCTACCGCCAGTGGAAGCAGGTATGGCTGTGGGGGGAGCGGGGCTGAGCCCCTGGGCTGCTCGGAGTGCAGGGGGCTCCTTGGGGCTGCGTTGGGTTTGGGGCTGCGTTGGGTTTGTGTGTCGCTTGGTGGGGGACTGCCGTGAGAACACGCCTCATTTTGGTTCTTTTGGTTCCCATCTGAGAGGAGCCCAGCGCTTAAACCGATGGACCTGATGCCGTTTAAACAGAGAAAAAGGGGTTTTCCAAACCCTCTGCTCACGCTGAAGGCTTCATATCCTCTTCCTTTTCCTCCCCCGCACGCTGCCTGCCCTGTGACGAGATGAGATGAGCGGTGTCTGCAGCAGCCACGTGTTGCTGGCGCGGGCTGTGCAGGGCGTGCTGCCGGGAGCTTGTGCAAGAGCCTCTCCCTTCCCTCCTACAGCAGCTGCGTGGCTCTGCCCCGCGCTCTGCCCCATCCCTGTGCACTGCTTTTCCTAGAGCACGGGAGCTGAGGCTGAGCTGCTGAGCTGCCCGGCTTTCTTATGCTTTCTTATGCACAAATGGAGATGTGTGTGGGTTTCAGATGTGTGGGGTCCTGTGTGTGCAGCAGGGCATGCATAGTGCGGGCACATAGAAACACACCTGCAGTGAGCACCACTGCTGTGAGCCGACTGCTGTGCTGAGATGTCATCCTTGCTGTTTAAATCCAGGAGCTGAGGTCTGTTGGCCTCTCTTTGCATTCTTGTCCTTTGCACATGCACAAGAACCCTTGCAGGTCACTGCTTTATGGGGGCGGTGTATTTCCTGCCCAGGGCAGCAGTGGCAGCGTGCAGTCTCCCGTCACTCAGTGCACATCGCTGCTGCTGGGGAAGCAGAGAGGTGGAGCAGAGTTGCACAGTCACATCTCTCCTGCAGCGAACGCCTCTGAATTATTTGTGACTGTCAGCTGCTGGGGGTTGCCAGCGAGAGGGAAGCCCTGATTCAGCTGTTGGAGGCCAACCCGCTGACATGTGAGAGGTGCTGCCCTATCTTTAGCCCACAAGGTGGATGTAGGGCCGTGCCTGAACTTTACAACAGTCATATGATAAATTGCAGATTCAGAATACTGGGCACACCTCAAAGGTCAGTGCAGCTGCGACGGCGCTTTCTTATTTAAGGCTCATAAGATGGTTAGAACTAATCCTCGTAGCGTTAGGGCTGAAAGGACAGGACGTGATGGGGCGGGATGGATTTTCAGTGGTGAGGCATTTAGTATTGAAACCATTGGAGACAGCATTGAAATACAGGCTTAAGGCTAATGAAGATGACCAGTGTCCTTGGGCTGAGGATATGCCACCGTAGGCTTCAGAGGTAATAGATAAACCTGAGCAACCTTGAGCAAAATACTGGTGATCAAAGGGTTGGCCTTGGTTTGGAGCCTCTGTGACAGCCCACCCGCTGCACACCTACATGTCACAAGAATTACAACCAAAACATGGGTGGTGAGGAGCTCCGAGTCACACCTCGTGTAGTGTCGCTCCCTGACTCACATTGAAAAAGGCTTCTAGGCTGTCAAGGGCAAGTGACCAAACAAGAAGGGAAATGGGAACTCCCTGAGCTGCATTCTTGCAGCCTGGAGATCACCTCTGCTGTCAACAAGTAGCCACGTGCCCTTAGATAGCTCAGTTCATCTGCCATTGCCCCATGCTGGAATGAGTTAATATGTCCTTACCTTGTCCCTAGCTGTCTGACACAAGCTAATCTTGATGTTGGCTTTGTCCTACTGAGAAGCTTTTCTTGTTCTATATGCATCTCATGGAAACCTGTGTAATTAAAGCACGTAGCTCCAGGGTGCCTAAACCAGTTCATAGGGGTTTTTATCTTTGCTGTGCCCACTGGGGCTGCACAGGCTTTTTCTGGTTGGAGTTGGTTCTTGCCAGGGGTAGCATACTTCCCTAGGGATCGTATTAGGCATGACATTCCTTCTGTTCAGGCTTATTTTTTATTGCTTCAACTTTGGCAGTTAATTTCCTATGCAAATCTTGTTGCCTCACGCTTGCTTCCTAAGAAGGCTCTCAAATTATGTCGTGTAAGGTGTTAATCATGATAGAGGACTGAGATTAGATACCTGATAGTTGCAGAGTATCCCCAATAAGAGCACGAGGCATTACGTTTGGCTAACTTTGGAAGGCAGTTGCCTGGAATCAGGTGGCCTTTCTACTCTCCTGCTTCCCTCAAATTTCTTGGGGGAATTCTCATGATTGTCCATTGCTTCGTGAGGGGGGAGAGCCGAAGCCATTTAGGCAATGATATTTAATTATGGTGGAAGAAGGGCCAGATCTTCTGAATGAACATAGGAACTGATGGTTTTTGATTGTCCCCTGAACAG
Seq C2 exon
AAAATTGTGAAGGCTGGAGACAAGGACCTGGACGGACAGCTGGACTTTGAGGAGTTTGTGCACTATCTGCAGGATCACGAAAAGAAGCTAAGGCTGGTCTTCAAGAGCTTGGATAAGAAGAATGATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000005095:ENSGALT00000008172:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.101 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF134991=EF-hand_7=PU(62.5=44.9)
A:
NA
C2:
PF134991=EF-hand_7=PD(34.4=51.2),PF134991=EF-hand_7=PU(24.2=34.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]