GgaINT0137860 @ galGal3
Intron Retention
Gene
ENSGALG00000003693 | MACF1
Description
NA
Coordinates
chr23:5653982-5664711:+
Coord C1 exon
chr23:5653982-5654117
Coord A exon
chr23:5654118-5664561
Coord C2 exon
chr23:5664562-5664711
Length
10444 bp
Sequences
Splice sites
5' ss Seq
AAGGTACTG
5' ss Score
8.56
3' ss Seq
CCCCTCTGCTCTGACCGCAGACG
3' ss Score
9.54
Exon sequences
Seq C1 exon
GCTCTCCCATCAGGAGAAGGACCAGATTTCTGCTCAGGTGGCCGCACTGAAGGACGCATATCAGACGCTCTGCACCGACACCACGGAGCAGCTCCAGCAGCTGCAGAGCCAGCTGGCTCAGGAGACAGAGCACAAG
Seq A exon
GTACTGAAAAGGGGGCTGAAAAAGGTGTTATTTGGTTGTGTGTAACATGGCTGCCCACCCACTGGCACACGGTTGCCCTCCCATCTTTTCTGTCCAGGCCTCACCTGAGGCTGGCCTGGTGGCTGGTGGCCCAGCAGGAGCTCTGGCGCAGCTCACTGAGAGTGGTCCTTTGCAATGCTTTCAGTCAGAGCTTGAAAAAGGGTTGGCTTGCTCACATGGTGGGCAAAGAGGTAAATGGTCTTCAGTCCTGGAAGCGCTCCCCCAGCAGCCTGCCTCCTCCACGTGGCACCCTTCTGAGCAGGAGGGCTGGAGGCACAAGGAGGAGGCTTCCTGCAGAACGCATTGCCTGCACAGCCTCACAGCGCGGTGAGGGCTTTGTTGGGGTTGTGACTGAAGGAAGACCCCCCTCCCCCCCCCCCAAGTGGGGGGCTGTGTTGTCCTACCAGCCCCGCAGGGCTGCTCGGGGCTCCGCACGCCCCAGTGCTCCGGGCGCATCCTTCCTGCCTCTGTGCCAGCTGTCTGCAGTCGTTCAGATATACATGTACGTGTTCTATAAGTGTATATACATGTGTCGGTGGATATATTTGTGTGTTTGCTTGCTGGCTCCCTGTACCCTGAAGCAATGACCTGCTCAATGATCTGGTTTTGGTGCTGGGTCAGTGACTCTGCAGCTGTCACCTCCCAGCACAGCATCTCCCTTCGAGTCGGCCAGCCCAGCACTTTGGCTGTCTCCATGTCAGTCCCACCAGCACTGGGCCGTGGCGGCTGGAAGGAGCCTGCCAGCAGGGAGGGCACTCGGCCCGTTCCCTCTTTCCCTTTTCCTCGCTCGTGGGCAGGCTGTGGTGTGCAGGCTTTGCCCAGGCCTCGCTGGGCCGCGTCCTCGTGGCGGGGCTCTGGCAGAGCAGCTTTCACTCAGGCTCTCGAAGCCCAGGAGATGAGATGAGGGCCGGCGCTGGGGCTGTGCTGCAGATCCTTGGCCCATACACGGGGCTGCAGCCTGGCTGCCGTGGGGTGCAGTTGCTTCAGTGTACAGGGAGCACGAAGGACTCTTAACATTTGCTTGCTGGAAACATCCAACTGTCAGACAGATGTTGTAAAGTTACAAAGGGCAAAAAAAAAAAAAAAGCAAAGCAGAGCGCGCTGAATTGAGCATGATGTGTCCCTGTACAGTTTGTGTTTCATGTCAACTGTTTTTAAGATTAACTGACATCCTTGCTTACAAGTTTAACTAACCCTCCGGGACTTAAGCAAACCAAACACACAGAGTGAAAGAGGACGACCTGTGTGGGGGGTTCTTTTTGCACACAAAGCGGTCGCATGCTGGACGCTAACACCAAGCTTTACACTGTGTGTGATACGGCTGAACTGCTCCATAAGGCTCTGTCTTTAACTGCTCAAGGCACACCCTGCAACTCTGGTAAGTAAAAGCCTTTTACTCCCCTCCTCCCGTCTCCTCTTTTATCATTCTCTTTCACCTCTTCTTCTCTGTCTTTCCATGGCTTGTTCATCTCTGAAGGTGTGTGTCTGAGTCTGGCGGTGCTGGTTGGTGTTCCCAGCACACCCACCCGCTCCGTGGGGGGCACTGGGCTGCTCTTAGGGCCAGGGCTGCCGGCCCCACCTGCTCCTGGGGTGCTGTGGTGCAGAATCACTCCTCCCCGCCCCAACAGAAATAACGCAGTGCTTGAGTCAACTCTACACCAGCTGGGAGACATCCGAAGGTCCTGAGTGCTGTTACTGTTTGCCATCAGTTCTTACCTTCCCTGCAAAAAAAGCCCCTCCAGAAATACCAAAGTCCCAAGCCCGTCACTGTCCCTCTGCTGGGATGTACAACTTTCTGTTTCTTCCCCGGCCCCCACAAAGCACAGCTAGGTGCTGGCATAGGGCAGAGCAGTTGGACGTGCTTGGGGAGCTGTGCATGCCAGGGGCAGTGCCTGTGCCCCAGTGCATGGCTGGTCGGTGCTGCTGGGAGCACCAGGGCTGTGGTGTTCCCTGGGCGTCTGGCACTAAGGGGCAGGATTTGAGCATGGCAGGAGTCAGGGTGGAAACTGCACTGGAAGAGGTTCCTAGAGGAAGAGGTTTTGTTAGTATGAAGTGGGTTTTGTGTCATCCTTCTTTTCTAAAGGCTTAAGTTGTGGAACAGCATTGGTGTCTGTGTCAGTTTCCTTTCCTGTTGCTCCATGGAGCATTAGGAACGCTTCTGGGTGTTGCTGCTTGCTGCTTTGCTGCATTACTGGTGGTGGATGTTGGAAGTATTTTAGTGCTGCCCTTGGTGATGGACTGGCTGGGCACCAAAACTTGCTGGCAGCCTGAAAGCTAGCAAATGCACCAATGTGTGTGCTGGGATGCCTTTGGAGTTGCACTTCAAGCACTTTGGGAGTAGCTTTTGGGTCTGTTTGGGTTTTTTTGGTCCACTCCCCGGATCTCCTGCAGTCCGAGTGCTGGAAATGCTTGATTTTGGTTTGATTCTTGTCCTTCTTTTTCTGTTCCAGGCCAACGAAGCAGTGGCAGGAGTGATCGATCTTGGCACAGTAGAAATATTCCCGGTCTTTGGTGCCATGCAGAAAGGTCTTATAGATCAGGAGACCGGCCTCGTCCTCTTAGAGGCTCAGGTGATCACATCCGACTTAGTTCTTCCAGAGACCGGTGAAAAACTCTCCTTGGAGGAAGGTCTGGCCAGAGACTTCATCAACCTCAGGACGTTCCATGTGCTGCAGGAGCTGAAGGATGCTCTCCATCGGGTCCATGAAGTCAGACGTGAAGGGAGGCAGCTGCTACCTGCTGCTGCTGCAGTGGAAGAGGGGAGGATTAGTGAGAGCACTGGGCTGAAGATTCTCGAGGTTGAACTTGTCACCGGTGGCTTTAAAACCCATCGGGGCAGAATCAGCATGGAGAAGGCTATGCAAGAGAGGCTCCTTCCTCCCCAGCTTTACTCCAGGCTGCTGTCCCACCTGGAGAGTAATAAGGTTTTGATTGACCCCAACACTGCTGAGAAAATCAACCTGTCTGAGCTCATGCAGCGGTGCATCCTCCACCAAGACACTGGACTGAGGTTGCTCCCGGTCAAGCAGCTGGCAGGTGGGATGGTGAGCCTGAAATCGGGCAGAAAAGTCAGCATCTTCCGTGCTGTCCAGGAAGGGCTGATAGACAGACAGGTGACAGTGAGGCTGCTGGAAGCACAGCTCTTTGCTGGTGGCATTGTTGACCCCAAGACAGGGCACAGGCTGGCTGTGGATGAGGCTGTGAGACATAATTTAATTGACCAGGATTTGGCGTGCACACTTCTAATCCGGCAGCTTCAGACAGGTGGCATCGTTGATACAGTCACAGGAGAGAGACTGACAGTTGATGAAGCTGTAAGGAAAGAGTTGGTAGCACCACGGGTTGCTTTGGTGATCCTTGAATCCCTCCAGTCCTTCATGGGGCTCCTGTGGCCGGAGACAGGGGAGGTTGTCCCAGCTGCGGATGCTTTAGAGCAAGGGATCCTGTCTACAGAGCTGGCTTACAAGATTCTCAGCAAGAGGCAGCTCATTAAGGCTGTCTTTATACCAGAAACCACTGAGGTGTTGTCCTGGAAGAAAGCAGTGGAACATGGCATCTTGGAAAGAGATGTGGCGAAGAAGCTGAAATCCATGGTGATACCTGATGTGATGGGCAGTGTGCAGCTGGCTGGTGCTCCAAGCGGGAGCTCCTCTGGAGGGAGCCCTGCAGGGCACCAGGGGCAGAGGGACCCTGTGCTGAGGAGTGATGATGAAAGGCTGATGTTTCACTTGATGACCCACAGCTACATCAACATCCATGATGGGCAGAAGCTGCTCTTAGTAGATGGAGAGTTGAGCAACCTCACTAAAGACCTCATCCAAACCCGAGAAAATGGATCCTGTGAACACCCACTGGAAGAGAATGAGAGCTTTGAAGAGACAAAGGAAACTGCAGCTCTTGAAAGAGAGCCTTGCAATGGTGTGGCTGTGCAGCAGCTTGAGCTGCAGCTTGCTCTTCCACAGGAAGGAAGCAAAAAGGTCCTGCCACCCAGATCCGCTCTGGAGAATGGGGAGGTGGTGATGGGGCCTGGGAGGCTCCTGTTGGACGATGCAGGAGATGTCCTGCATGTGGAGGAGCAAGAGCAGGTTTGTTCTGAGCAGGCTACTACCCAAAGTGAAACTGATGCTGAATCTGGGAGAGAACAAATAGCTTCTGCAAGCAAGGAGAAGCATCAGGTAAAATTATCCGTGCTGGGACAGCCCTGCGACTCTGACAGGGGATCCACAGAAACAGAGGAAACAACCATTGAAGCAGAAGAGTCCAAACCCACTGCAGCAGATGGAGTGGAAAGCATCAGAGGTCAGAAGAGGGCATTGGAAACTGCGGCAGGTGTTGTGAAAAGCGAGAGCCATTTGGTGGTGCGTATTTGTGAGAGCAGAGAGAGACTGGAAGTCGTGGCAGGGAGACCTTGGGGTGCAGAGGAACCTGAATTAGAGGGGGAAGGCGTTGGAGGGATTTACTTCCTGAATGGGGAGACGGCTCAGAATGGCACGCTGGGAGGAGAGGAGGCTGTGCCCACCCGAACTGCAGAGGCTGAGCAAATGGAGTACAGTGAAAATGCTGCGGGCGTATTGCACGTGGAGGAGGGGCTGAGGGCAGAAGCGCTGGGCGGTGAGAGCGATGCTGATGCAGCCCTGCCGCAGCCACGGGGACGGGACGAGGGGGACGTCCTGGAGATGCTGCAGGCACAGCTCCGGAGCGGCGGCGTTCTGTGCGAGCAGACGGGCAGAACTCTTCTTCTGAACGAAGCTGTGGCCTGCGGTGTGGTGCCCGGCCACACGGCTGTGAAGCTCATGGAGAGAATGGAGATGTTCAGTGGCTTCTTTGACTCACGCACACGCGAACCTTTGACCACCGAGGATGTCATTGAAGAAGGTCTGATGGATGAGAAGCTTCTCCAGAAGGTGCTCACGTCTGACAAAGCCATCAGCGGTGTTCTGGACCCGGGCAACAACTTTGTCTACTCCATCAAGGACGCTGCTGCCGTTGGCCTCCTGGACAAGGAGACAGCGCTGAGGCTCTTGGAGGGGCAGGTGGTTACAGGGGGGATCGTTGACTTGAAACGTGGCAAAAAAGTGTCGGTTACTTTGGCTTCAAACCTCGGCCTCATAGAGCCAGTGAGTCAGAAGGAGCTGGTCAGGCTGGAGAAGGCTTCCAAAGGGAAAAGCACCGATGAGGCCACCAGGCAGAAGCTCCTTAGCTTGCAGGCTGAGACCAGCGGGATTGTGGATCCCAAAACCAGGCAGCCTTTGACCGTTGCACAGTCAGTTGAAAGAGGGCTCCTTGAGAGAGAAAAAGCATTTCAGCTGTTGACCAGGCAGATTGCTGGCGGAGGGATCCTTCACCACGCGTCGGGGATGCGGCTGTCGGTCAGCGACGCAATGAAACATGATTTGATCGATAGAGATTTATGTAATGAACTCATGAAGGCTGAAGGTGTGTGCCTGCAGGAATGCACCCACCCAGTGACAAAGGAAAAGCTGCCCTTGCCCCAGGCGGTGGCAGCAGGGATTGTTAGTCCAGAATTCCAGAAGAAAGTGCAAGAAATCCAGGCTGGGGCTGGCAGCGTTATTGATCCCACTTCTGGGCAGAGAATGGCACTCAGCTGGGCAGTGCAGGAGGGGCTGCTGCCCCGGGAGGTGGTGGAGAAAGCCCTGTCCTCCCCGGAGCTGAAGCACGGCATCGTGGACCCCGAGAGCTGCATGGTCGTGCCCTACACTGAGATGGTAAAGAAGTGCAGAATCGACGTTGAGTCTGGGCAGAGGTACCTGGAGGTGCATCCCTTCAGAGCCTTGCGGGACGAGGCGTCGGGCCGGGCGCTGACGTGTGCCGAGGCGCTGCGGCTGGGGAGGGCCGACCCCCTGCCCACACTGCGGCTGCTGCAGGGCCAGGCTGACAGCGGGGGCTTTGTGCAGGGGGCTGTCAGCAGCAGGCTGTCCCTGCAGGCCGCTCTGCAGAAGGGGCTGCTGGACGAGGCGATGGCCACAGTCATCGGCTGCAGGCAGCTGCAGGCTGGGGGGATTGTGGATGCTAGCAGTGGGAAAAGATTGGCGTTAGAGGAAGCTGTTGAAAAGGGACTGGTTGGCCGAAGGTTAGCTGCTGCTCTTCAGAAGGCGCAGATGTCGATGGAGAATGATGGCTCTGAGGTCCTCATGGCAGATAAACCCCACCTTTCCCAGGAAAAGATGGAAAAGTCTCCAAAAGAGGAAGGTGTGGCCCTGCATAGCAGTGCTGCTGTGTCTGATGGCATGGAGCACAAAGCCAGGTACAAAGCTGTGAGTTCCCCAGCAATGGGAGGGAAACTAAAGCTGATCCCTCTGGAGGCTTCAGAGGAGGGTGTGAGAGAGCAGCAAGAAGTGGGCAAAATGATTCCAGGATCCTCAGCACTGAGTGCAGCATCTCTCTCTGTAGAGGTGGTGANNNNNNNNNNCCTGGTGCTCAGCACAGAGGATGTGTCAGAACATGAGGATGGACGTCTGGGGTTGACCTTATGGGATCACTGCAATGGATTTGGCAAACGACGCAGTGATGTATGACTGAAATCACTTCATTGTGGCTTCTTTTTGTTGGAGCATTGCTTACAAATGACTAATAAGTAGGAGCTTTTTTTGGCACTTCTACTGTAACACAATAGATCTCTTGCCATTTCTAAGCTTGTGTTGGAAAAAGAGCCATGCGTTCTATTTTTCCTGTAGTAAATCTTGGAGATAAGGCCAGCGAGTGGAAAGTCCCTGAAATGGGATACTCTCAAGGGGTTTCTTCTTTTAAGAATTACTTATAACCATTTGTTTTCTCTTTTCTCTAAATCTGAACTTTTGTTTCACCGTTGGGTTCTGCAGATCAAGTTCAGCAAGAAGATGTGCCTGGAGCACGACGAGAAGCTCATCTCCTATCTCTCCATGCTGCGAGACATTGAGATGAGGATTAAACGGGTGCAGCCGGCGGAGCAGAACCTGGATGTGCTGCAGACACTGCTGCAGCAGGCAGAGGTGAGCACAGCCCCAGCATCTGTGTACAAACCCCATCTCTCCCTGCTCTGATACTCCCTGAGCATGGCTGAAATGAGTTTTATGGCCTGGAGAAAGGCAGTTTGAGTGCTGGCAGCCAGCGGGGCTGCACGGACGGGTCGGGTGCGATGAATCTTTCCAGCAGATGCATGCAGAGTTTGGAGCTGGTTCTCCAAAACCTCTGCAGTGCTGTCAGTTTTGGCAGTGGGAAGATGAAGTCGCTGTATGGGAGCCGTAACGATGCTGTTTTGCCCCAGGCCCTGGGCGCGGAGCTGCGGGAGCTCAGCTTTCCAGTGAATCAGGAGTTGGACGCCGTGAGGCGGATCGTGGCCAACCCGCCTGAAGAAGTCCCCGAGCAACTACTGAGGGCCTTGGAGAAGGACGCCAAGAACCTTCAGAAGTCTCTGAGCTCTGCAAGTGATATCCTGGAGTCCCGGCTGGAAAGCCTTCGTGATGCAGCAGAAGCCCAAAAGGTAGAGCCGTGGCTGTCCCTGCTGCCTTCTGTTGCACTCCACGCCCTGCCCGGCTGGGGGTCTGCCCTCCCCACTCCCTGTGTAAGTGGAACACTTTTGTGTTTCAGGCTGAAGTCACAGCACACCATGAGACCCTCCAGGGGAAGCTGCAGGAGCTGCTGTGCTGGGTGTCCAGCACGGTGCGGGCGCTGGACGGCAGTGATTACCAACACACGGCGGATGTGGGCAGTCTGAGTCGCTGCCTCCAACGCTATAAGGTAACCATGGCGATGCCCCCAATCCTCCCCGATGGATGAAGTTCTGTTTTCTGTGCGGAGGAGAAGCTGTTAATCCTGCTTCCCTCCTGGAGCCTCGGTGGGTTTGAAGGTTATCCTTCATCACAGAAGGAGCAGAGATGCTGTGTTTGCTCGAAAGTAATTTGTTTGCATAAAGCGTGAGCCATCTGCTTTGGCCACTTGGGAACGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGGTGGAAGCTGAGAGTTCTGTGGGATTCCAGTGGGGCTGAGCGCTGCTGCCTTGGGGGGCCCTGAGAGCCCCTTCATCACACCTCCCTGCTCTCCATCAGTGCTGTGAGGAGCCCCAGCCCCCCTCCCCCTCACCCCTCTCCACAGTCATATCATGTGGCAGTGATAGCTCTCAAGATTCAGTCAGCTCAGCATCTCCTGCACGCTGGCAGCTGAAGCCGAGGGTTTGAAGGCTGTGTGGTCGATGGGGCTGCCTGACAGGCCCTTCCCTTCCCTCCAGGAGCTGAGTGAGCCCCTTGCTGACACCAAGTCTCAGCTCGACACCACCGCCTTCGACATTCAGCTCCTTATCTCGGAGCACGCCCAGGACCTGAGCCCCCAGCAGAGCAGGCAGCTGCTGCGGCTGCTCAATGAGCTGCAGAAGGCTTTCCGGGAGCTGGCGGGGCGCGTGACGGCGCAGGTGGAGGTGCTGCAGGTCTGTCTCCAGCAAGCGGAGCAGACGGATCAGGTGAAGGTTGTGAGACTTCGGCTTCCTGCCTGCACTTTGCTCGCTGAAGCACTTTCCGGCCACAGGAGTGTGCGCTGAGCCCCTCGTCTGGGGTGCCCCCTGCATGCCACTCACGGTTTATGACTTCTTACTGCACATCATGAGCTTCCTCTAAAGTCTGTCTTCTTCCTGTCACGTAGCTCCCAGGTGGGAAGTTGCTTTCTGTGCAGAAGGCCGAGCCTTCCCGAGCTGTGGGTAGCACAGTCCTGTGCTGCCATTCTATCTTGGGCCGGGTGGGACACGCCCTGGTCTCTGGCCCACCAGGAAAACCCTGTGTGTAGCTGGCACCACAGCTGGGTCCTCGTGTCCTATTGTTGGTGCACAAGCAAGGTTTTGCTGACCTTGAGAAACAGCTGATGATGCACCAAGGCAGCCAGCAGCTGCAAAAGCAAGTCCCCAGGTCCTGCTGCATTCCAGCAGTGCCCATCACTGCATGGATCCTCTTGTTCAAGACAGTATTAATGTGGTTTTATTAACAGTTGCTCTCTGTAACTCTTGCCTGTCCCATCTGGAGTGTGTGTGTGTGTATTAACCAGTTTGCTTTGCTTTTTCAGATTGAGTGTGCGCCCATCCTAACCCAGGAAGAACTCGCTTTGCAGCGGAAGAGCTCTTAAGAAGGCTCTTTCAGTTTGCTTCTGTTGTTTATCTTATGACTGTGAGACACAAGCACAGTGTTTTGCGCAAGTTTGTACATCACGTTGCTGAAATGCCCATTGAAACACAAACCTTCACCTCCCCTGGCGAAGGGAAGAGGAACGGTGCAGGGACTCTCAGGCCACATCATGCTCAATTGCTCAAACAGGCGCTTCTGTTGTTCTCTGGCAGCAAAATGTGGGAGCTGGGTCAGCTGCAGAAATGCTTCCTCTCCCCTGAGCTCCCTCTCCAACCCCACGTCCAAAAGCCAGCCCTGGGTCAGCTGGAGCTCCACAGCAATGCTACCCACTGCCAGGCGGTTACTTCTCCTCAGCTGAGTTTCTGGTGCAGTTTTCCTGTTCAGAACATTGAATGGAAGAGGCACAGAAACTTCTGATGGTGCTCTCCCAAGAGAGGGCTGCGTAATCTGGAGCTGGATGGGGGTTCTTAAAAAGCAGAACGAGAGACACCTGCTTGAGTGGTGGCAGATGTACACTGCAGTCCCCCAGCACTGTGCTGGGCTTTGGACCTCAGCCCCATTCCTGCTGTGTGTGTGAATGTGAGAGGGGGAGAGAGCCCAGGGAGAGCTGCAGAAGCCAATTTCTGTGCTGTGTCCCCTCCAGGAAGGTGCTCCAGCTGTAACCTCCTGCCTTGCTTTTCAGCCGTGTGCACAGCAGGGCGCAGCCCTGGTATTAATACCTCTCTCCCCCTCTGCTCTGACCGCAG
Seq C2 exon
ACGCTGCAGGAGCAGCAGGCAGCCCGCGCACAGAACCTGGCCGAGCTCAGCTCCTGGCTGGCGGCCGCTGAGGACACGCTGGTGGAGCAGCAGCGAGCAGCCAGCCAAGGAGACCTGCCTGCCTTGCAGCAGAGGCAAAGCGACGTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000003693:ENSGALT00000005857:35
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.413 A=NA C2=0.620
Domain overlap (PFAM):
C1:
PF0043516=Spectrin=PD(31.9=78.3)
A:
NA
C2:
PF0043516=Spectrin=PU(40.2=90.0)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]