HsaEX0011796 @ hg38
Exon Skipping
Gene
ENSG00000165695 | AK8
Description
adenylate kinase 8 [Source:HGNC Symbol;Acc:HGNC:26526]
Coordinates
chr9:132863665-132875199:-
Coord C1 exon
chr9:132875115-132875199
Coord A exon
chr9:132866904-132866953
Coord C2 exon
chr9:132863665-132863778
Length
50 bp
Sequences
Splice sites
3' ss Seq
CAAATCTTTTTATTCCACAGTGC
3' ss Score
8.68
5' ss Seq
ATAGTAAGT
5' ss Score
8.65
Exon sequences
Seq C1 exon
AACATGCTGGAGCAACTCCTGATCCACCAGCCCGAAGATCCCATCCCCTTCATGATCCAGCACTTGCATAGAGACAACGACAATG
Seq A exon
TGCCCAGGATTGTAATATTAGGTCCACCCGCCTCAGGGAAAACAACAATA
Seq C2 exon
GCAATGTGGCTCTGCAAACATCTGAACAGCAGTCTCCTCACCCTGGAGAACCTGATCTTAAATGAGTTTTCCTATACGGCCACCGAAGCCAGAAGGCTTTATCTGCAAAGGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000165695_MULTIEX1-3/13=1-4
Average complexity
S
Mappability confidence:
80%=80=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.110 A=0.044 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
PF132071=AAA_17=PU(15.9=82.4)
C2:
PF132071=AAA_17=FE(42.0=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGCAACTCCTGATCCACCAG
R:
ATCAGGTTCTCCAGGGTGAGG
Band lengths:
132-182
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- The Cancer Genome Atlas (TCGA)
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development