HsaEX6063673 @ hg38
Exon Skipping
Gene
ENSG00000165695 | AK8
Description
adenylate kinase 8 [Source:HGNC Symbol;Acc:HGNC:26526]
Coordinates
chr9:132866904-132878777:-
Coord C1 exon
chr9:132878172-132878777
Coord A exon
chr9:132875115-132875199
Coord C2 exon
chr9:132866904-132866953
Length
85 bp
Sequences
Splice sites
3' ss Seq
TGTCTGCCCTGCACCCACAGAAC
3' ss Score
9.86
5' ss Seq
ATGGTGAGC
5' ss Score
8.27
Exon sequences
Seq C1 exon
TTCCCGCGTCTGTTTTAAAGATGGGTAAACTGAGGCACAGGGAGCCGGGCCGGGGAGCACTGACAGAACCAGAAGCAGGTTCTGCCTCCCGTCCCCTCGGAGGGCCGACTTGCCCCTTCTGGGTTTCGTCGGGGGTCTCAGATACGAGGAGGCCCAGCTGGAAGCCACCTGAGGGTGTCCCCCGCTAAGATGCGCAAATGGGAAAAGCGAGGCCGGGGTTGGGGAAAGAACTTGCCCGAGCCGCAGAGCGCGTCAGCCGGGGAGGTCGGGGCGGGGGCGACCCGCGCGACCGAGGATCGGGTATCTGGGCCCGGCGCGGAGCCTGCAGGGCGGGGCCGCGGCGCGTGCTGATGACGCAGTCGGCGCGGCGGCCCTAGCGACGCGGTTACTAGGGAGCGGCGAGCCGAGACGGCTACATGGACGCCACTATCGCCCCGCACCGTATCCCCCCCGAGATGCCCCAGTACGGGGAGGAGAACCACATCTTCGAGTTGATGCAG
Seq A exon
AACATGCTGGAGCAACTCCTGATCCACCAGCCCGAAGATCCCATCCCCTTCATGATCCAGCACTTGCATAGAGACAACGACAATG
Seq C2 exon
TGCCCAGGATTGTAATATTAGGTCCACCCGCCTCAGGGAAAACAACAATA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000165695-'1-7,'1-3,4-7
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.393 A=0.110 C2=0.044
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF132071=AAA_17=PU(15.9=82.4)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTAGCGACGCGGTTACTAGGG
R:
TTGTTGTTTTCCCTGAGGCGG
Band lengths:
175-260
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains